Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00460 ATGATTGCTGCTAATTTAGTTTCAGCTTTCGCAAGAGACAGTAGCTCGCTTCCAGTAGATTCGCCCACGTCAATGGAGGAGGAATCATGGACAAATTGGCTGTGTAATTTGgaATCTAATGACTAcaatttcatcaatgaatGGGACATAAATGCCGATGATAGGAATTTCCCAAGCAATGTTACATCCACGGCACCCTTACATGAAGAGAACTCGCAGCCTTGTTTCTCAGCAGATAGCAGCCACTGCTCTTATGCCACCCTCAATGTTGAAAACTGCAGCACCATGAGCAATTCCTCGGTCGATGAGAGTAGCTTAGAGAGGCCTGCCAAGCTTCTCAAGATCACAAGCACTGAGAATCTCTCACCAAAGCAGGATTTGGCTTGCTTTGACAATGTGAATGCACAAATCTACGGTCACCGTGTTAATGATTCTGGCTTCGAGCCAAAGGACAAGGTTTCGGCGGGTAATATCGTAACCAAGTCTTCAACTTTGTCCTCGAAGGGGACATTAGAAAgtcaaaagaatgaaacaagAAACAGCCAAGAATGCAAGAGAACCAACTCGGTGACAAGAACTCCTTCTCATGCTCAAGATCACATGATAGCTGAAAGACTAAGGAGAGAAAAGATTGCCCAGCAATTTATAGCCTTATCAGCACTTATTCCTGGCCTAAAGAagATGGACAAGGCTTCTGTGCTTGGAGATGCTATTAAGTACGTGAAGCAACTTCAAGAGCACGTGAAACTGCTGGAAGAACAAACCAAGAGAAGAAGCATAGAGTCTGTGGTATTTGTGAAGAAATCTCATCTGTCTACCGATGAAGACATCTCAGATACCTCGTCAAATTCCTGCAATGACCCCTGCAAATGGAACCGATCACTCCCAGAAGTTGAAGCGAGGGTGTCAGAGAATGACGTTCTCATTCGAATCCACTGCGCCAAACAGAAGGGTCTCCTAATAAACATACTCAGAGAAATTGACAACCTTAATCTCTCAGTAATCAACACCAGTGTTCTACCTTTTGGTACCTCCATTCTGGACATAACCATAGTAGCTCAGATGCAAGATGAGTTCAGGTTGACCGTGAAAGAGCTGGCTACCAACCTTAGAGTGGCATTGGTGAGGTTTACATCGGGAAATGGAGTTTTACCATG 1157 0.4313 MIAANLVSAFARDSSSLPVDSPTSMEEESWTNWLCNLESNDYNFINEWDINADDRNFPSNVTSTAPLHEENSQPCFSADSSHCSYATLNVENCSTMSNSSVDESSLERPAKLLKITSTENLSPKQDLACFDNVNAQIYGHRVNDSGFEPKDKVSAGNIVTKSSTLSSKGTLESQKNETRNSQECKRTNSVTRTPSHAQDHMIAERLRREKIAQQFIALSALIPGLKKMDKASVLGDAIKYVKQLQEHVKLLEEQTKRRSIESVVFVKKSHLSTDEDISDTSSNSCNDPCKWNRSLPEVEARVSENDVLIRIHCAKQKGLLINILREIDNLNLSVINTSVLPFGTSILDITIVAQMQDEFRLTVKELATNLRVALVRFTSGNGVLP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00460 385 MobiDBLite consensus disorder prediction 164 196 - -
Bva08g00460 385 PANTHER PROTEIN, PUTATIVE-RELATED 25 377 - -
Bva08g00460 385 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 199 261 IPR036638 GO:0046983
Bva08g00460 385 SMART finulus 201 250 IPR011598 GO:0046983
Bva08g00460 385 CDD bHLH_AtNAI1_like 195 269 - -
Bva08g00460 385 Pfam Helix-loop-helix DNA-binding domain 200 245 IPR011598 GO:0046983
Bva08g00460 385 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 195 244 IPR011598 GO:0046983
Bva08g00460 385 MobiDBLite consensus disorder prediction 164 198 - -
Bva08g00460 385 Gene3D - 195 264 IPR036638 GO:0046983
Bva08g00460 385 PANTHER BHLH TRANSCRIPTION FACTOR 25 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00460 Bva-Chr8 2362694 2364968 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00460 31 378 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 39.118 2.08e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva08g00460 HLH 7.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00460 - - lang:109348843 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00460 08 2362694 2364968 Bva08g00460 08 2362694 2364968 ECH