Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva08g00453 | ATGGCTGCAGAAATTGGCCTTCTCTCCATGACCCAGAtccaaaaattatcacaacCCCAACACcgtcaaaatcaaaatcaacctCAGCCAAACCCTAACTCTACTATCACCTCGCCGTGGATGTGGAACCCTATGGAAAACCAGGAAGATGATGACTCTTGGGAGGTCAGAGCTTTTGCAGAAGACACCAGAAACGTCATGGGTAGCACTTGGCCTCCCAGGTCTTACACCTGCACCTTCTGTAGAAGGGAATTTCGTTCTGCCCAAGCTCTAGGCGGCCACATGAACGTGCACCGCCGTGACCGCGCCCGGCTCCACCACCAAGCGCAACCGGGTTCAGTCAACGTCAACCCCAACTCATCTCCCACACCCTCATTCATAATCCCAGCTCAAGAGCTTGTTGCAAATGGTGGATTGTGCTTTCTCTACCATCTACCAAACCCTAATGGCACCTTTGCCACTACTACCAGCAATCTAAATGCATGTACTGAATCACCATCCACGCTCCTTTCCATTTCACCTTACCCACCAAACAACTTGATGCAAACTTGCTCTCCTTCCTTTGATTTTCCGGTGGCAAGGTCTTCAGGGATCACGTCTTCTCACTGTAATTCTAGCAAAGTCGAACAACATACAAGCTCCTCCAACAATAATGGCCACGAAGAGCTTGATCTAGAGCTCCGGCTGGGGAACAGACCAAAACCAACCTG | 710 | 0.4803 | MAAEIGLLSMTQIQKLSQPQHRQNQNQPQPNPNSTITSPWMWNPMENQEDDDSWEVRAFAEDTRNVMGSTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHHQAQPGSVNVNPNSSPTPSFIIPAQELVANGGLCFLYHLPNPNGTFATTTSNLNACTESPSTLLSISPYPPNNLMQTCSPSFDFPVARSSGITSSHCNSSKVEQHTSSSNNNGHEELDLELRLGNRPKPT | 236 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva08g00453 | 236 | SMART | c2h2final6 | 76 | 98 | IPR013087 | - | |
Bva08g00453 | 236 | MobiDBLite | consensus disorder prediction | 221 | 236 | - | - | |
Bva08g00453 | 236 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 78 | 98 | IPR013087 | - | |
Bva08g00453 | 236 | MobiDBLite | consensus disorder prediction | 199 | 220 | - | - | |
Bva08g00453 | 236 | MobiDBLite | consensus disorder prediction | 199 | 236 | - | - | |
Bva08g00453 | 236 | Gene3D | Classic Zinc Finger | 68 | 121 | - | - | |
Bva08g00453 | 236 | SUPERFAMILY | beta-beta-alpha zinc fingers | 73 | 103 | IPR036236 | - | |
Bva08g00453 | 236 | Pfam | C2H2-type zinc finger | 76 | 100 | - | - | |
Bva08g00453 | 236 | PANTHER | OS07G0101800 PROTEIN | 41 | 230 | - | - | |
Bva08g00453 | 236 | PANTHER | ZINC FINGER C2H2-TYPE/INTEGRASE DNA-BINDING DOMAIN-CONTAINING PROTEIN-RELATED | 41 | 230 | - | - | |
Bva08g00453 | 236 | MobiDBLite | consensus disorder prediction | 15 | 43 | - | - | |
Bva08g00453 | 236 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 76 | 103 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva08g00453 | Bva-Chr8 | 2325025 | 2325735 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva08g00453 | 40 | 233 | C2H2 Transcription Factor Family | AT4G17810 | 39.713 | 1.53e-38 | 130 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Bva08g00453 | zf-C2H2_6 | 4.9e-06 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva08g00453 | - | - | jre:108984087 | 284.263 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva08g00453 | 08 | 2325025 | 2325735 | Bva11g01866 | 11 | 16242419 | 16243147 | BWGD | |
Bva08g00453 | 08 | 2325025 | 2325735 | Bva08g00453 | 08 | 2325025 | 2325735 | ECH |