Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00452 ATGGCTGGTCTGGATTTAGGCACTGCTTCTCGCTTTGTTCAAAATCTTCACAGACCCGACTTGCACCTTCAGCAGCAGCACCAACCCGACTCTGATGACGATCGTAATCGGGCTGGCCCCTTCTCCGCGGAAGATGTTCCCCGCCAAGGCCTTGAGCTGGCCTCCGCCGGGCCTGGTGACATCGTTGCCCGTCGATCCCGAGGCCGACCAACTGGTTCCAAGAACAAGCCCAAACCGCCCGTCATCATAACCAGAGAGAGTGCCAACACGCTCCGGGCTCATATTCTCGAAGTGGGCAACGGCTGCGATGTGTTCGACTGTGTTGCAACCTACGCGCGACGCCGACAGCGTGGGATCTGTATTCTGAGCGGCAGCGGAACAGTCACGAATGTCAGTTTGAGACAGCCGGCAACCGCTGGAGCCGTTGTTACTCTTCACGGAAGGTTCGAGATATTGTCCTTGTCCGGGTCATTCCTGCCGCCGCCAGCACCACCGGGAGCGACGAGCCTGACAGTATACTTGGCCGGAGGTCAAGGACAGGTAGTAGGAGGGAACGTGGTGGGGGAGTTGACCGCAGCAGGGCCGGTGATTGTGATTGCTGCTTCGTTTACGAACGTGGCTTATGAGAGATTACCATTGGATGAGGAGGCGGAGCAGCTTCAGATACAGCCACCGGCTTCTCAAGGAGGTGGCTCTGTGGGGAACAACAACCAATTCCCGGATCCATCGTTGGGTTTACCCTTCTTCAATTTGCCACTTAATATGCAGAATGTTCAGTTACCAGTTGACGGGTGGGCGGGAAACCCATCAGGAGGACGTCCACCATTTTG 830 0.5663 MAGLDLGTASRFVQNLHRPDLHLQQQHQPDSDDDRNRAGPFSAEDVPRQGLELASAGPGDIVARRSRGRPTGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFDCVATYARRRQRGICILSGSGTVTNVSLRQPATAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTVYLAGGQGQVVGGNVVGELTAAGPVIVIAASFTNVAYERLPLDEEAEQLQIQPPASQGGGSVGNNNQFPDPSLGLPFFNLPLNMQNVQLPVDGWAGNPSGGRPPF 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00452 276 MobiDBLite consensus disorder prediction 23 41 - -
Bva08g00452 276 Pfam Plants and Prokaryotes Conserved (PCC) domain 92 205 IPR005175 -
Bva08g00452 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 1 276 - -
Bva08g00452 276 ProSiteProfiles PPC domain profile profile. 88 225 IPR005175 -
Bva08g00452 276 Gene3D - 91 227 - -
Bva08g00452 276 MobiDBLite consensus disorder prediction 16 82 - -
Bva08g00452 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 276 IPR014476 GO:0003680
Bva08g00452 276 SUPERFAMILY AF0104/ALDC/Ptd012-like 88 217 - -
Bva08g00452 276 CDD DUF296 92 175 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00452 Bva-Chr8 2312182 2313598 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00452 1 276 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 67.752 2.63e-106 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00452 - - pvu:PHAVU_003G230600g 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00452 08 2312182 2313598 Bva11g01867 11 16258059 16259572 BWGD