Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00450 ATGGATTCTCGTGAACCGCCACAGCtgcaacagcagcagcaaccaCAGCCGCAGTCACAACCACAACCGCCATCAGTGGCATCAAACATGATGATGGGGCCCGCTTCGTATGCCTCGAGTATGCCCAATCCCAGTAGTTCCCCTATGATCAGCCCCAATTCTACGGCCACGATGATGGCACCTGCCACTGCCCGATTCCCATTCAACTCAGGAGTTCCACAACCCCTTCCTCAAACAAAGCCTCCGGAGCTTCTTAACTCCACCAGTCCTTACGATGGGTCTTCTTCTGCGTTGAGGCCGTGTGGATTTAGCATTGATTctgggaagaagaaaagaggccGGCCAAGGAAATATTCGCCGGATGGTAACATTGCTTTGGGTTTGGCTCCTACGCCTATGTCTTCTTCTGCCGGTCAGGGCGATTCCAGTGGCACGCCGTCTACCGAACCTTcggcaaaaaaaaataggggaAGGCCACCGGGCTCGGGAAAGAAGCAATTGGATGCCCTTGGAGCTGGCGGTGTTGGGTTTACTCCGCATGTAATCATGGTGAAAGCTGGCGAGGACATTGCATCAAagattttttccttctctcagCAAGGACCTCGGACAGTTTGTATTCTTTCTGCCAATGGTGCTATCTGCAATGTCACCCTTCGTCAGCCAGCAATGTCTGGTGGTACTGTGACATATGAGGGCCGATTTGAGATCTTATCTCTATCAGGTTCTTTCCTGCTTTCTGAAAATAATGGTGGTCGTAGCAGAACAGGTGGTTTGAGCGTGTCTCTTGCAGGGTCTGATGGACGAGTTTTAGGTGGTGGAGTTGCTGGAATGTTAACTGCAGCATCACCTGTGCAGATCATTGTGGGTAGCTTTGTTGCGGATAGGAAAAAGTCGAGCACAAATGTTCAGAAATCTGGCCCTTCATCAGGAACAGCATCCCAACTGTTAAATTTTGGTGCACCTATGACTCCAACCAGTCCTAACTCCCAAGGGCCTTCAACCGAGTCGTCTGATGACAATGGTAACAGTCCTTTCAATAAAGGCCCTGGACTCTACAGCAATGCCAGTCAGCCCATTCATAATATGCCAATGTACCATCATCAACTATGGACTGGCCAAACTCAGCAATG 1133 0.4687 MDSREPPQLQQQQQPQPQSQPQPPSVASNMMMGPASYASSMPNPSSSPMISPNSTATMMAPATARFPFNSGVPQPLPQTKPPELLNSTSPYDGSSSALRPCGFSIDSGKKKRGRPRKYSPDGNIALGLAPTPMSSSAGQGDSSGTPSTEPSAKKNRGRPPGSGKKQLDALGAGGVGFTPHVIMVKAGEDIASKIFSFSQQGPRTVCILSANGAICNVTLRQPAMSGGTVTYEGRFEILSLSGSFLLSENNGGRSRTGGLSVSLAGSDGRVLGGGVAGMLTAASPVQIIVGSFVADRKKSSTNVQKSGPSSGTASQLLNFGAPMTPTSPNSQGPSTESSDDNGNSPFNKGPGLYSNASQPIHNMPMYHHQLWTGQTQQ 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00450 377 Gene3D - 179 306 - -
Bva08g00450 377 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 13-LIKE ISOFORM X1 91 372 - -
Bva08g00450 377 MobiDBLite consensus disorder prediction 1 170 - -
Bva08g00450 377 MobiDBLite consensus disorder prediction 81 95 - -
Bva08g00450 377 ProSiteProfiles PPC domain profile profile. 173 318 IPR005175 -
Bva08g00450 377 MobiDBLite consensus disorder prediction 1 16 - -
Bva08g00450 377 CDD DUF296 178 292 IPR005175 -
Bva08g00450 377 MobiDBLite consensus disorder prediction 299 360 - -
Bva08g00450 377 MobiDBLite consensus disorder prediction 129 152 - -
Bva08g00450 377 SUPERFAMILY AF0104/ALDC/Ptd012-like 177 294 - -
Bva08g00450 377 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 91 372 IPR039605 GO:0003680
Bva08g00450 377 MobiDBLite consensus disorder prediction 23 60 - -
Bva08g00450 377 SMART AT_hook_2 153 165 IPR017956 GO:0003677
Bva08g00450 377 SMART AT_hook_2 109 121 IPR017956 GO:0003677
Bva08g00450 377 Pfam Plants and Prokaryotes Conserved (PCC) domain 179 293 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00450 Bva-Chr8 2299887 2304650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00450 91 377 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 50.599 3.92e-80 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00450 - - zju:107430497 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00450 08 2299887 2304650 Bva11g01868 11 16265066 16269012 BWGD