Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00440 ATGGTAGGGGCACCACTGCCTCCAGGTTTTCGTTTCCACCCAACTGATGAAGAATTGGTGGGATATTacctgaaaagaaaagttgaggGGCTCGAAATCGAGCTTGAAGTAATACCCGTGATTGATTTATACAAATTCGATCCGTGGGAGTTACCGGAGAAATCTTTCCTGCCAAGTCGAGATTTGGAATGGTTTTTCTTCTGTCCACGGGATCGCAAGTACCCAAATGGATCACGAACAAATAGAGCCACCAAAACTGGCTACTGGAAAGCCACCGGAAAAGACAAGAAGATCGTCAGTCAAAACACTCCTTCCACAGCGACGGCTACAGGGTACCGGAAAACACTGGTTTTCTATCGCGGACGAGCTCCTTTAGGGGATCGAACAGACTGGGTCATGCATGAGTATCGCCTTTGCGATGATCTTGGTCAAGGATCACCAAGTTTTCAGGGTGGTTTTGCTCTGTGCCGAGTTgttaaaaagaatgagaaggCAAATGATTATTCTCAAGGAGAGCAAAAAGGCAAGAGGGCTGGAACCAGTTCCACCAATGGGGATCACACTTCAATCAGAGTCTCCAACGAGCCTTTGAGCATCTCTAGTGATGTTTCTTCTCAGGCAAGTCACATGAACCATGAGAGTCGTTATTCAAGCCCAATAACTTCACCATGTAATGTGCCTCCAGTTACTGTGTTTGAGACCAATCCTGCAAACTTCTGGGTCTCCCCTGATTTTATTCTCGATACTTCGAAGGACTTCCCTCAAGTACAAGAGTCTGAATACTTTCCACAGTGTGGCCTTTCAAGCTCCTCAACACCATGGCAGTCATTCGAACACACAGAAATTTCACCTAGTTCatcttattcaaattttaacgGGGAAATGGAATTTGGTGATGATTACAGTCGAATTAGCTGCATGTCACCTTACTCGGGACAAGGAAATTTCATGGACTTCTATGGAGATAAGGATGTGTCCTACGAAGGTTATAACCAAATCAATTCAATCAGATATCCAAAAActttctg 1028 0.4241 MVGAPLPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDLYKFDPWELPEKSFLPSRDLEWFFFCPRDRKYPNGSRTNRATKTGYWKATGKDKKIVSQNTPSTATATGYRKTLVFYRGRAPLGDRTDWVMHEYRLCDDLGQGSPSFQGGFALCRVVKKNEKANDYSQGEQKGKRAGTSSTNGDHTSIRVSNEPLSISSDVSSQASHMNHESRYSSPITSPCNVPPVTVFETNPANFWVSPDFILDTSKDFPQVQESEYFPQCGLSSSSTPWQSFEHTEISPSSSYSNFNGEMEFGDDYSRISCMSPYSGQGNFMDFYGDKDVSYEGYNQINSIRYPKTF 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00440 342 MobiDBLite consensus disorder prediction 173 193 - -
Bva08g00440 342 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 342 - -
Bva08g00440 342 Pfam No apical meristem (NAM) protein 7 138 IPR003441 GO:0003677|GO:0006355
Bva08g00440 342 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 342 - -
Bva08g00440 342 MobiDBLite consensus disorder prediction 165 193 - -
Bva08g00440 342 ProSiteProfiles NAC domain profile. 6 161 IPR003441 GO:0003677|GO:0006355
Bva08g00440 342 SUPERFAMILY NAC domain 4 161 IPR036093 GO:0003677|GO:0006355
Bva08g00440 342 Gene3D NAC domain 15 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00440 Bva-Chr8 2260145 2263254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00440 1 296 NAC Transcription Factor Family AT4G17980 53.746 1.94e-102 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva08g00440 NAM 4.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00440 - - gmx:100792714 521.161