Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00431 ATGCTCATGGGTTGCTTCCAGTCCAAAACCGCTTACCTCAACTCTCTTGACCAACCGTCCGGCATACCCGAGAAACCCGATCCAGCTAATGGGGATGATCTTGATCAAGAATGCCAAGTTCCAGCATTCAAAGAGTATGGTCTCAATGAACTCCGAAGGGCCACGAATGAGTTCAGCACTTATAACATTGTATCAGAGAGCGGCGAGAAAGCTCCTAATGTGGTCTACAGAGGGAAACTCGAGAACAATCGGTTGGTCGCTGTTAAACGGTTCTCCAAACAGTCTTGGCCTGACGCTCAACAGTTCATGGCAGAGGCAGCTGGAGTTGGAAAAGTGAGGCACAAGAGACTGGTGAATCTAATTGGTTGTTGTGCTGAAGGAGATGAACGGCTCTTGGTGGCTGAATATATGCCAAATGATACCCTGTCCAAGCATCTCTTTCATTGGGACAAGCAGCCATTGCCATGGGAAATGCGGGTTAGAGTTGCATACCATGTTGCACAGGCACTGGATCATTGTAGTATGGAAAACCGaaaaatttatcatgattTAAACGCGTACAGGATTCTTTTTGATGAGGATGGTGATCCCCGTTTGTCTAGTTTTGGTCTCATGAAAAATAGTCGAGATGGAAAAAGTTACAGTACTAATTTAGCCTACACGCCACCAGAGTTTTTGCGGACAGGTAGGGTTATCCCAGAGAGTGTAATCTACAGTTATGGAACAATACTGTTGGATCTTTTAAGCGGCAAGCATATTCCTCCAAGCCATGCTTTGGATCTGATTAAAGGGAAAAATGCATTGTTGTTGATGGACTCGTCCCTAGAAGGACAGTATGCAAATGATGATGCTACAAATTTGGTTGATCTTGCTTCAAAATGTCTTCAGATTGAGGCCAGAGATCGACCTGATATTAAGTTTCTTCTTGCAGCAGTTGCGCCTCTTCAAAAGCAGAAAGAGGTTGCATCTCATGTGCTGATGGGCCTTTCTAAAAATACACCTGTCCTACCAACCATGCTTTCTCCTCTTGGAAAGGCTTGTGCAAGGGTGGATCTTACTGCTGTGCATGATATATTGCTAAAAACGGGTTATAAAGATGAAGAAGGTGCAGAAAACGAGCTTTCATTCCAAGAGTGGACGCAACAAGTGCAAGATATCTtgaacacaaaaaaatttggggATATTGCATTCAGAGACAAGGATTTCAAAAATGCAATTGAATATTATTCTAAGTTAGTGGTTATGATGTCAGTTCCTTCGGCTACTGTTTTTGCAAGGAGAGCCTTCTCCTACTTGATGAATGACCAGGCAGAACTTGCCTTAAGGGACGCAATGCAGGCTCAGGTATGCATACCTGATTGGCCAACTGCATTTTACCTGCAAGCACTTGCACTCTCCAAGCTGGGAATGGAAACTGATGCACAGGACATGCTTCACGATGGGCATGCCTTTGAAGCTAAAAGGTCTAATAGCTGGCGTGGTTA 1484 0.4353 MLMGCFQSKTAYLNSLDQPSGIPEKPDPANGDDLDQECQVPAFKEYGLNELRRATNEFSTYNIVSESGEKAPNVVYRGKLENNRLVAVKRFSKQSWPDAQQFMAEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSMENRKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTILLDLLSGKHIPPSHALDLIKGKNALLLMDSSLEGQYANDDATNLVDLASKCLQIEARDRPDIKFLLAAVAPLQKQKEVASHVLMGLSKNTPVLPTMLSPLGKACARVDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRAFSYLMNDQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAQDMLHDGHAFEAKRSNSWRG 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00431 494 SUPERFAMILY TPR-like 385 482 IPR011990 GO:0005515
Bva08g00431 494 Gene3D Transferase(Phosphotransferase) domain 1 138 330 - -
Bva08g00431 494 Pfam Protein kinase domain 74 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00431 494 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 3 493 - -
Bva08g00431 494 ProSiteProfiles Protein kinase domain profile. 61 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00431 494 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 3 493 IPR045845 GO:0004672|GO:0009742
Bva08g00431 494 Gene3D Phosphorylase Kinase; domain 1 33 136 - -
Bva08g00431 494 SUPERFAMILY Protein kinase-like (PK-like) 44 312 IPR011009 -
Bva08g00431 494 Gene3D Tetratricopeptide repeat domain 384 492 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00431 Bva-Chr8 2216517 2221975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00431 23 315 Glycoside Hydrolase AT3G07070 33.645 6.29e-40 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Bva08g00431 Pkinase 5.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00431 K14500 - gmx:100793576 916.376