Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00422 ATGGTTTGCACTGCCAATGATTTACAGAAATGGAAAGATTTTCCCAAGGGGCTTCGGGTTCTTCTCCTTGACGGAGACACCAATTCTGCTGCCGAGATAAGTGCAAAGCTTGAGGCCATGGACTTTATCGTTTCTACATTCTGCAATGAGAATGAAGCATTGTCAGCAATCTCAAGCAGAACAGAAGGATTCCATGTTGCTATAGTGGAGGTGAGTACAAGCAGCAGCGAGGGCTGTTATAAGTTTCTCGAGAATGCCAAGGACTTGCCAACTATTATGACTTCAAGCAATCAATGCCTGAGCACCATGATGAAGTGCATAGCGctTGGTGCAGTTGAGTTCCTAAGCAAACCACTCTCTGAGGACAAGCTTAGGAATATCTGGCAGCATGTGGTTCACAAGGCGTTCAACTCTGGGGCAAGCGTCCTTTCTGATTCACTTAAACCTGTCAAAGAATCTGTAGCATCCACATTGGAGCTCCAAATGGACAATGGACAACATGAAAATGGGATGTCAATAGATTTAGATAAGGTATCTAAGTTTACTGATAATGATCTGGAGCAGTCTGTAGGAAGTGATAAATTCCCGGCTCCTTCAACCCCACAATTAAAACAGGGAGCAAGGTTACTTGATGATGGGGATTGCCAAGAACATACTAATTCctcaacagaaaaagaaaatggggagCATGAGCATGAGGGGGAATCCAAATCCGTCGAAATTACATGTGAGAATTTATATGCCGATGGCACTCTTCCACCAAATAAACCTGAAAAGACTTTGATCAAGGAGGAAGAGGACTTTGTTGATGGTTCTAAGAGGGAAAGTACTGTTTCTGCACATCCACCTAATAGAAAGGTTCCCAGCAACATTAATGGTGGTACTGCATCTCCTAATAAAGCTGGTGTCCCTAGTGTTTCACGTGATACCAAATGTAATcgtaagaaaataaaggTAGACTGGACACCTGAGTTGCACAAAAAGTTTGTGCAAGCAGTGGAACAACTAGGTGTTGATCAAGCCATTCCTTCTAGAATACTGGAGCTAATGAAAGTAGAGGGCTTGACAAGGCATAATGTAGCAAGTCATCTCCAGAAATATAGAATGCATAAGAGACAAATATTGCCCAAGGAAGAAGATCGAAGATGGCTTCATCAGAGGGATCCAATGCAAAGGAGCTATTACCCACAAAGACCTATAATGGCGTTTCCACCATATCAGTCTAACCACACCCTATCTCCTGCTCCGGCGTATCCTATGTGGGGACAACCTGGCGGTCATCTTCCAGGTGTCCAGGTGTGGAGCCCACCTGGTTATCCCGTGTGGCAGCCTACAGAAAGTTGGCACTGGAAGCCAGTTTCAGGGatGCATGCTGATGCATGGGGTTGCCCAGTGTTACCACCTGCTCAAGGTCCTTGTTTTTCCTACCCTCAACAGAATATGCCTGGATTTCACAATGCTCATGCAGCTGATTACAGCTCCAGCATGCCTCGAAGCACCTCTGAGCCTCATCCGGAAGAGGAGGTTATTGACAAGGTAGTGAAGGAGGTAATAAGCAAGCCATGGCTACCCATGCCCTTAGGCCTAAAACCTCCTTCGACTGATAGTGTATTAGCTGAGCTCTCCAGGCAAGGCATATCCAACATCCCTCTTGGCAACAAGGGTAGCTCTAACCCCAGCTG 1682 0.4459 MVCTANDLQKWKDFPKGLRVLLLDGDTNSAAEISAKLEAMDFIVSTFCNENEALSAISSRTEGFHVAIVEVSTSSSEGCYKFLENAKDLPTIMTSSNQCLSTMMKCIALGAVEFLSKPLSEDKLRNIWQHVVHKAFNSGASVLSDSLKPVKESVASTLELQMDNGQHENGMSIDLDKVSKFTDNDLEQSVGSDKFPAPSTPQLKQGARLLDDGDCQEHTNSSTEKENGEHEHEGESKSVEITCENLYADGTLPPNKPEKTLIKEEEDFVDGSKRESTVSAHPPNRKVPSNINGGTASPNKAGVPSVSRDTKCNRKKIKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHKRQILPKEEDRRWLHQRDPMQRSYYPQRPIMAFPPYQSNHTLSPAPAYPMWGQPGGHLPGVQVWSPPGYPVWQPTESWHWKPVSGMHADAWGCPVLPPAQGPCFSYPQQNMPGFHNAHAADYSSSMPRSTSEPHPEEEVIDKVVKEVISKPWLPMPLGLKPPSTDSVLAELSRQGISNIPLGNKGSSNPS 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00422 560 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 557 IPR044825 GO:0003700|GO:0045893
Bva08g00422 560 SUPERFAMILY CheY-like 16 134 IPR011006 -
Bva08g00422 560 MobiDBLite consensus disorder prediction 282 306 - -
Bva08g00422 560 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Bva08g00422 560 Pfam Myb-like DNA-binding domain 319 368 IPR001005 -
Bva08g00422 560 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 316 371 IPR006447 GO:0003677
Bva08g00422 560 Gene3D - 18 140 - -
Bva08g00422 560 Gene3D - 312 374 - -
Bva08g00422 560 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 313 372 IPR017930 -
Bva08g00422 560 SUPERFAMILY Homeodomain-like 315 373 IPR009057 -
Bva08g00422 560 MobiDBLite consensus disorder prediction 267 310 - -
Bva08g00422 560 MobiDBLite consensus disorder prediction 212 238 - -
Bva08g00422 560 PANTHER TWO-COMPONENT RESPONSE REGULATOR-APRR2-LIKE PROTEIN 1 557 - -
Bva08g00422 560 Pfam Response regulator receiver domain 20 127 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00422 Bva-Chr8 2170845 2176069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00422 1 550 Response Regulator Gene Family AT4G18020 51.536 2.42e-154 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bva08g00422 Response_reg 1.2e-07 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00422 - - gmx:100784905 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00422 08 2170845 2176069 Bva11g01891 11 16373884 16379215 BWGD