Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00409 atggggaaaaagaaagtgaagttTGCTTTATACCCAATATTGCTTATGTtgattttccttctctttcagTGTTCGAATGGTTCCAATCTTATCCGTCAATCTTGCCAGGAAGCCTCAAAGGGCGACCCAAATCTCAGTTATAACTTCTGTGTTGCGTGCCTGGAGGCCAATCCCAAGAGCCGACCCACTAGAATTGAAGAGCTTGTGGATGTGTCAATTCGGATAACCAAGTCCAATACAACCAACATCATTTCCAACATTTCCGAGTTCCTGAGGAACCAAAATCTAAGTCAATATGCGAAGGCTTGCTTGAGAGATTGCTTTGATCTTTACTCCGATGCTCTTTCCGAATTACAAGATGCAGTGTATGCTTTCAATTCCGGGGATTTGGACACTGCTAATATAAAGGTTAGTGCTGCTTTGGATGCTTCAGTTACTTGTGAAGATCaattcaaggaaaagaaaggtgAAACGTCTCCTTTGACAAAGGACAACAACATTTACTGCCAACTCAGTGCAATATCTCTGGCTTTCATCCAAATGTGTCATCAGAACTCTTG 560 0.3768 MGKKKVKFALYPILLMLIFLLFQCSNGSNLIRQSCQEASKGDPNLSYNFCVACLEANPKSRPTRIEELVDVSIRITKSNTTNIISNISEFLRNQNLSQYAKACLRDCFDLYSDALSELQDAVYAFNSGDLDTANIKVSAALDASVTCEDQFKEKKGETSPLTKDNNIYCQLSAISLAFIQMCHQNS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00409 186 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 181 IPR035513 -
Bva08g00409 186 Pfam Plant invertase/pectin methylesterase inhibitor 29 177 IPR006501 GO:0004857
Bva08g00409 186 SMART PMEI_2 26 178 IPR006501 GO:0004857
Bva08g00409 186 CDD PMEI-Pla_a_1_like 35 181 IPR034088 -
Bva08g00409 186 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 182 IPR035513 -
Bva08g00409 186 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 19 181 - -
Bva08g00409 186 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 183 IPR006501 GO:0004857
Bva08g00409 186 PANTHER PECTINESTERASE INHIBITOR-LIKE 19 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00409 Bva-Chr8 2124579 2125474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00409 50 172 Carbohydrate Esterase AT1G53840 26.667 8.76e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00409 - - gmx:100817110 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00409 08 2124579 2125474 Bva08g00409 08 2124579 2125474 ECH