Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00400 ATGGCAGCCGCTTCGCCGGCCCTTAACAACAATAGCACCAAAGGGATGATGGTTGAATCCACAGCCACCACGAAGCCAACATCTCTCGCTGCCGCTGCTAACCTGGGGCATCGTACCGATACACCTCCGAAATCTCAACGTGGGCATAATAAACCAAAGTGTAGACAGTGCGGCAATGTTGCTCGCTCTAGGTGTCCATTTGAATGTTGCAAGAGTTGCTGttcaagaaatcaaaatccaTGCCATATTCATGTGTTGAAGGCAAATGCAACTTTTCCAGACAAGGCTGCATCTTCTGGTGCTCCTATTGAGCAGCAATCCTCAGAACCATCTCCATCAACGAGTTCAAGTAGAGCTGCATCACTTCGACAACTTTCCAACAGCTTTGTCCAGTTCAATAATCTGAATGTTTCACTTCGTTCAAGGAAGCCGCTTACTAAAAAGGATGCTGCATCTATCAATGAATGGAGATTTTCCAAGTTAAGGGAATACAAGGATAGAAACATTGAATTGGAAAACGAGGCCCTTGAACGATACATGCAGAATGTAGATTTACTGGAAGAAATATTAACTGCGAAGCCTGTGGAAGATGATGCGTCCACTGCATTAGAGTCTGATCCTACTTGCACAGAGAACGAGAACGAGATGATGGTATCAGGGCTTAAATTGCTGCTAAGATCAAACTCAAGGAGAAGTGATAGTGTCAGAATGATAATACAACAAATTATTGATGAAGGATTAAAGAAACTTCCGGATTGTGCTCTAGATAGCGATGTCAATGAACCAAATGATGGAGAAGAACCCAATAAAGCTtcaaaaaaggcaaaaaattGGAGGACTGAAAGGTTATCTGCTATCAGTGAACTTATGGACAAACTAAATAAAGTCCGAAATGAGGAGGATTTGAAATCTTGCTTGGAGATGAAGTCTCAACTCTTCAATTTGGACCAAGGCTCAGGCAAAATAGAATCTGAAGAGAATGGAACTCTCAAGAATGAGACCGCTGAAAGTGATACGACACTAGCAAAAGAATTGGATTATTCATTACCAAAATTGGTCGGGGCCATTGAAATTGATCAAGAAACTCTCAATGCCATAGACAAACACTTTTCTTCGCTTGAGCATGTAGAGGAGTTATG 1139 0.4109 MAAASPALNNNSTKGMMVESTATTKPTSLAAAANLGHRTDTPPKSQRGHNKPKCRQCGNVARSRCPFECCKSCCSRNQNPCHIHVLKANATFPDKAASSGAPIEQQSSEPSPSTSSSRAASLRQLSNSFVQFNNLNVSLRSRKPLTKKDAASINEWRFSKLREYKDRNIELENEALERYMQNVDLLEEILTAKPVEDDASTALESDPTCTENENEMMVSGLKLLLRSNSRRSDSVRMIIQQIIDEGLKKLPDCALDSDVNEPNDGEEPNKASKKAKNWRTERLSAISELMDKLNKVRNEEDLKSCLEMKSQLFNLDQGSGKIESEENGTLKNETAESDTTLAKELDYSLPKLVGAIEIDQETLNAIDKHFSSLEHVEEL 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00400 379 Pfam Domain of unknown function (DUF702) 53 89 - -
Bva08g00400 379 MobiDBLite consensus disorder prediction 1 30 - -
Bva08g00400 379 MobiDBLite consensus disorder prediction 95 120 - -
Bva08g00400 379 PANTHER ELECTRON CARRIER/IRON ION-BINDING PROTEIN 1 379 - -
Bva08g00400 379 MobiDBLite consensus disorder prediction 100 120 - -
Bva08g00400 379 Coils Coil 169 189 - -
Bva08g00400 379 MobiDBLite consensus disorder prediction 1 55 - -
Bva08g00400 379 MobiDBLite consensus disorder prediction 257 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00400 Bva-Chr8 1998650 2002259 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Bva08g00400 DUF702 2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00400 - - gmx:100816049 441.81