Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00397 ATGAAgtgtttcttcttcaaaaGGTTATCGAAGTCTGACCCTGGATTGCAAAATgaaagcaagaagaaaaatccagCGATGGATCGCATATCAAAGTCTACGAGTTCTCTTCCGTCGCCAAGGAGCGTAAGTGAATTgtataaagagaaagagcaCAATTTGAGAGTTTTTACTCTGGAAGAGCTTAGTGAAGCAACCAGTGGTTTCGATAGGATGAAAAAGATTGGAGAAGGGGGTTTTGGGAGCGTGTATAGAGGTACAATAAGGCCTGAAAATGGCCGTGGTGATCCAATCATAGTTGCCATAAAAAGGCTTAATACGCGTGGCTTCCAGGGACATAAAGAATGGCTTGCAGAAGTTCAATTTCTCGGCATTGTCAATCACCCAAATTTGGTTAAACTTCTGGGATACTGTTCCGTAGATGGAGAAATAGGAATCCAGAGGTTGTTAGTGTATGAGTTCATGCCTAACAGGAGCTTAGAAGATCATCTTTTTAATAGGCGATTTCCCGTCTTGCCTTGGAAAACAAGATTGCAGATCATGCTGGGTGCTGCCCAAGGAATAGCTTATTTACATGAGGAAATGGAGGTTCAGGTGATTTACCGagattttaaaacttcaaatgtTCTACTGGACAAGGACTTCCATCCAAAGCTCTCAGATTTTGGTCTTGCTAGGGAAGGTCCAACAGGTGACCAGACTCATGTATCAACTGCGGTGGTTGGAACACAAGGTTATGCTGCTCCAGAGTATGTTGAAACAGGCCATCTCAAAGTTAAGAGCGACATTTGGAGTTTTGGTGTAGTTCTGTATGAAATCCTCACGGGGAGGCGAGCATTGGAAAGAAGCCGTCCAACAATGGAACGAAAGCTTCTAGAATGGGTTAAACAGTATCCTGTTGATAGTGTGAGCTTCACCATGGTAATAGACCCACGACTCAGAAACCAGTATTCTATTGGTTCAGCTCGGAAAATTGCCAAGTTGGCAGATAGCTGCTTAAAAAAGAATCCCGAAGATAGGCCATCCATGAGTGAGATTGTGGAAGGCTTGAAGCAAGCATTGCAGTATTCAGAAACATCAAACACTGCGACTTCTGAATCATCTCGATCTAAAGTGGTTCTAAAAGGCAAATA 1133 0.406 MKCFFFKRLSKSDPGLQNESKKKNPAMDRISKSTSSLPSPRSVSELYKEKEHNLRVFTLEELSEATSGFDRMKKIGEGGFGSVYRGTIRPENGRGDPIIVAIKRLNTRGFQGHKEWLAEVQFLGIVNHPNLVKLLGYCSVDGEIGIQRLLVYEFMPNRSLEDHLFNRRFPVLPWKTRLQIMLGAAQGIAYLHEEMEVQVIYRDFKTSNVLLDKDFHPKLSDFGLAREGPTGDQTHVSTAVVGTQGYAAPEYVETGHLKVKSDIWSFGVVLYEILTGRRALERSRPTMERKLLEWVKQYPVDSVSFTMVIDPRLRNQYSIGSARKIAKLADSCLKKNPEDRPSMSEIVEGLKQALQYSETSNTATSESSRSKVVLKGK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00397 377 SUPERFAMILY Protein kinase-like (PK-like) 51 349 IPR011009 -
Bva08g00397 377 PANTHER RECEPTOR-LIKE KINASE PLANT 14 360 - -
Bva08g00397 377 Gene3D Transferase(Phosphotransferase) domain 1 155 375 - -
Bva08g00397 377 ProSitePatterns Protein kinases ATP-binding region signature. 75 103 IPR017441 GO:0005524
Bva08g00397 377 Gene3D Phosphorylase Kinase; domain 1 48 154 - -
Bva08g00397 377 MobiDBLite consensus disorder prediction 14 28 - -
Bva08g00397 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Bva08g00397 377 ProSiteProfiles Protein kinase domain profile. 69 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00397 377 MobiDBLite consensus disorder prediction 358 377 - -
Bva08g00397 377 PANTHER OS01G0588500 PROTEIN-RELATED 14 360 - -
Bva08g00397 377 CDD STKc_IRAK 75 352 - -
Bva08g00397 377 MobiDBLite consensus disorder prediction 13 44 - -
Bva08g00397 377 Pfam Protein kinase domain 70 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00397 Bva-Chr8 1983075 1986303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00397 3 350 Glycoside Hydrolase AT3G07070 41.061 3.03e-88 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva08g00397 Pkinase 2.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00397 - K00924 gmx:100305403 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00397 08 1983075 1986303 Bva11g01913 11 16515518 16518078 BWGD
Bva08g00397 08 1983075 1986303 Bva08g00397 08 1983075 1986303 ECH