Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00388 ATGAATTACGGTTTTGTTGTTCAACGGGACTATGCCACATTGCCATGCAGATCCGCGTTCGAGCGCGTGTATAAAAAGCTCAAGTACCAATGTGCTTTTCTCcttaaagaatattatattacgctaaatatatatatatatatcctgtGTCCCTCTGGTGGTTGGTTCAGCTGGGCCGATAGTGTAACTCGCTTTTACTCTCAAAAGACGTTTGGTGATTTGCTAGAGGtATCTGGTTTTAAGGTGCTTGTGGAAACTGGTTTTTGCTCTTGGGTCGGTATGGAGGAGAGGTATGAACCATTGAAGGAGCTTGGTTCTGGGAATTTTGGAGTGGCGAGGTTGGTAAGAGACAAGAAGTCTAGAGAGCTTGTTGCTGTCAAATACAtcgaaaggggaaaaaagATTGACGAAAATGTTCAAAGGGAGATCATTAACCACCGATCTTTAAGGCATCCCAACATCATCAAGTTCAAAGAGGTGTTGCTGACTCCTACCCATTTGGCTATTGTGATGGAATATGCTGCAGGTGGCGAACTCTTTGATAGAATATGCAGTGCTGGTCGATTTAGTGAAGATGAGGCAAGGTTTTTCTTCCAGCAGCTAATATCTGGAGTTAGCTACTGTCATTCCATGCAAATTTGTCACAGAGATCTGAAACTGGAAAACACCCTCTTGGACGGAAGCCCAACACCCCGACTTAAAATTTGTGACTTCGGTTATTCTAAGTCTGCTTTGCTTCATTCTCAACCCAAATCAACAGTTGGAACTCCTGCATACATTGCTCCAGAAGTTCTGAGTCGAAAGGAGTATGATGGGAAGATTGCAGACGTTTGGTCCTGTGGTGTGACTCTTTATGTGATGTTAGTTGGAGCATACCCATTTGAAGATCCTGAAGATCCCAGAAACTTCAGAAAGAGCATTTCGAGGATAATGAGTGTTCAGTACTCCATACCAGACTATGTGCGCGTCTCTGCAGACTGCAGGAATCTTCTTTCTCAAATCTTCGTTGCTGATCCTGCCAAgAGGATCACCATTTCGAAGATAAAGGAGCACCCTTGGTTTTTGAAGAACTTGGCCAGAGAGATCGTTGAAGCAGAGAAAAAAAGCTATGAGGAAGGACAGAAACTAGAGCAACCAAGTCAGAGTGTTGAAGAGGTGTTGCGGATCATACAGGAGGCAAGGACGCCTGGGCAAGCTTCAAAAGACGGGGACCAGAGTACTGGTTCAGGGATATTGGATGGCGAGGATGTTGATGAGTCTGAAATTGATGTCAGTGGCGACTATGCCGTGTG 1292 0.4288 MNYGFVVQRDYATLPCRSAFERVYKKLKYQCAFLLKEYYITLNIYIYILCPSGGWFSWADSVTRFYSQKTFGDLLEVSGFKVLVETGFCSWVGMEERYEPLKELGSGNFGVARLVRDKKSRELVAVKYIERGKKIDENVQREIINHRSLRHPNIIKFKEVLLTPTHLAIVMEYAAGGELFDRICSAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPTPRLKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKSISRIMSVQYSIPDYVRVSADCRNLLSQIFVADPAKRITISKIKEHPWFLKNLAREIVEAEKKSYEEGQKLEQPSQSVEEVLRIIQEARTPGQASKDGDQSTGSGILDGEDVDESEIDVSGDYAV 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00388 430 SMART serkin_6 98 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00388 430 Gene3D Phosphorylase Kinase; domain 1 86 173 - -
Bva08g00388 430 ProSiteProfiles Protein kinase domain profile. 98 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00388 430 MobiDBLite consensus disorder prediction 388 430 - -
Bva08g00388 430 CDD STKc_SnRK2 97 353 - -
Bva08g00388 430 PANTHER RHO-ASSOCIATED PROTEIN KINASE 1/2-RELATED 96 418 - -
Bva08g00388 430 ProSitePatterns Protein kinases ATP-binding region signature. 104 127 IPR017441 GO:0005524
Bva08g00388 430 Gene3D Transferase(Phosphotransferase) domain 1 174 362 - -
Bva08g00388 430 SUPERFAMILY Protein kinase-like (PK-like) 88 362 IPR011009 -
Bva08g00388 430 PANTHER SERINE/THREONINE KINASE 96 418 - -
Bva08g00388 430 Pfam Protein kinase domain 98 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00388 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00388 Bva-Chr8 1939253 1942668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00388 97 357 CBL-interacting serine-threonine protein kinases AT4G24400 42.379 2.54e-65 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Bva08g00388 Pkinase 3.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00388 K14498 - tcc:18606143 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00388 08 1939253 1942668 Bva11g01921 11 16552846 16555768 BWGD
Bva08g00388 08 1939253 1942668 Bva08g00388 08 1939253 1942668 ECH