Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00375 ATGGAACTTCATTCTAAAGATCTACTTAGCCTTGTTTGTATTATTCTGCTCTTACCTGCATTATGTACCTCTCAGGACGGTTTCACATATTCTAGGGCAACTTATTATGGCAGCCCAGATTGTTACGGGAGTCCAAAGGGAGCTTGTGGGTTCGGCGAATATGGAAGGACAGTGAACGATGGAAGTGTTACAGGCGTGTGTGGGCTATGGAAGAATGGATCTGGTTGTGGTGCATGCTATCAGGTTAGATGCAAAATACCAGACTACTGCGATGACGATGGAGCATACGTAGTGGTGACGGATTTTGGTGTGGGAGACAACACAGACTTCGTCATGAGTCCACGTGCCTACTCAAGATTAGGACGCAACCCAGATGCTTCTGCAAAGCTCTTCAAATGCGGCGTCGTCGATGTAGAATACAGAAGGGTCCCTTGTAGATACTCTTACAACATCCTCGTCAAGGTCCACGAGCACAGCAGAAACCCTCACTACTTAGCCATTGTGGTGCTCTACGTCGGTGGAACAACCGACATCACTGCCGTTGAGTTGTGGCGGGAGGACTGCCAAGAATGGAGGCCTATGCGGAGAGTATTTGGAGTCGTATTCGACTATGAAAACCCACCAAGAGCTCAAATTAACTTGAGGTTCCAAGTGAATGGCCAAGCAGACTGGGTGCCTCTCAAAAGGCCTCTCCCCAGCACTTGGGAGGCTGGAGCTGCTTATGAAACCGACATTCAATTTGATTA 746 0.4826 MELHSKDLLSLVCIILLLPALCTSQDGFTYSRATYYGSPDCYGSPKGACGFGEYGRTVNDGSVTGVCGLWKNGSGCGACYQVRCKIPDYCDDDGAYVVVTDFGVGDNTDFVMSPRAYSRLGRNPDASAKLFKCGVVDVEYRRVPCRYSYNILVKVHEHSRNPHYLAIVVLYVGGTTDITAVELWREDCQEWRPMRRVFGVVFDYENPPRAQINLRFQVNGQADWVPLKRPLPSTWEAGAAYETDIQFD 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00375 248 PANTHER EXPANSIN-B1-LIKE PROTEIN 5 247 - -
Bva08g00375 248 PANTHER EXPANSIN-B3 5 247 - -
Bva08g00375 248 SUPERFAMILY Barwin-like endoglucanases 14 148 IPR036908 -
Bva08g00375 248 Pfam Lytic transglycolase 65 140 IPR009009 -
Bva08g00375 248 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 163 243 IPR007117 -
Bva08g00375 248 SUPERFAMILY PHL pollen allergen 150 242 IPR036749 -
Bva08g00375 248 Pfam Expansin C-terminal domain 153 225 IPR007117 -
Bva08g00375 248 PRINTS Expansin/Lol pI family signature 191 205 IPR007118 GO:0005576
Bva08g00375 248 PRINTS Expansin/Lol pI family signature 133 149 IPR007118 GO:0005576
Bva08g00375 248 PRINTS Expansin/Lol pI family signature 229 243 IPR007118 GO:0005576
Bva08g00375 248 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Bva08g00375 248 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Bva08g00375 248 Gene3D - 147 248 IPR036749 -
Bva08g00375 248 Gene3D - 19 146 IPR036908 -
Bva08g00375 248 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 150 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00375 Bva-Chr8 1856783 1858029 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00375 4 245 Expansin Gene Family AT4G17030 58.704 1.29e-102 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00375 - - gmx:100802855 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00375 08 1856783 1858029 Bva11g01925 11 16572006 16573350 BWGD