Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00374 ATGGAACTTCATTCGAAAGACCTACTTGGCCTTGTTTGTGTGATTCTGCTCTTACCTGCAGCACTTTGTACAACATCTCAAGGATACTTTACTAGTTCTAGAGCAACCTATTATGGTGCCCCATATGACTATGGAACTTCAAgtggaGCATGTGGCTATGGCGATTATGGAAGGAAAGTCAACGATGGAAAGGTTACAGCCGTGTCGTCTAAGCTATGGAGGAACGGTGCTGGTTGTGGTGCATGCTATCAGGTTAAGTGCAAAATGGCACAGTACTGTGATGTCGATGGAGTAATCGTGATGGCAACGGATAATGGTGAGGGAGATAGAACTGACTTCATTATGAGTGGACGTGGCTTCTCAGAATTGGGACGCGACCAAGACACTTCTGCAAAGCTCTTCAAATACGGCACTGTTGACGTACAATACAAAAGGGTCCCTTGTAAATATGCTTCCAACATCATCGTCAAGATCAAAGAGCAAAGCAGCAACCCTTACTACTTAGCCATCGTGCTTCTCAATGTTGGTGGAGATAAGGACGTTACTGCTATTGACTTGTGGCAGAAGGACAGCAAAGCATGGATGCCTATGCGCAGAGTGTATGGAGCTGTATTCGACTTTTCTAACCCACCGAGTGgtcaaattaaattgagatTCAACGTTAATGGCAATATGGAGCTAGCCAAAAGCCCTATCCCCAGCAATTGGAAACCTGGGGCTTCTTATGACACCaagattcaattttatta 749 0.4326 MELHSKDLLGLVCVILLLPAALCTTSQGYFTSSRATYYGAPYDYGTSSGACGYGDYGRKVNDGKVTAVSSKLWRNGAGCGACYQVKCKMAQYCDVDGVIVMATDNGEGDRTDFIMSGRGFSELGRDQDTSAKLFKYGTVDVQYKRVPCKYASNIIVKIKEQSSNPYYLAIVLLNVGGDKDVTAIDLWQKDSKAWMPMRRVYGAVFDFSNPPSGQIKLRFNVNGNMELAKSPIPSNWKPGASYDTKIQFY 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00374 249 Gene3D - 150 249 IPR036749 -
Bva08g00374 249 SMART dpbb_1 65 150 IPR007112 -
Bva08g00374 249 PANTHER EXPANSIN-B3 5 248 - -
Bva08g00374 249 PRINTS Expansin/Lol pI family signature 230 244 IPR007118 GO:0005576
Bva08g00374 249 PRINTS Expansin/Lol pI family signature 194 208 IPR007118 GO:0005576
Bva08g00374 249 PRINTS Expansin/Lol pI family signature 136 152 IPR007118 GO:0005576
Bva08g00374 249 PRINTS Expansin/Lol pI family signature 29 44 IPR007118 GO:0005576
Bva08g00374 249 PRINTS Expansin/Lol pI family signature 69 87 IPR007118 GO:0005576
Bva08g00374 249 PRINTS Expansin/Lol pI family signature 47 65 IPR007118 GO:0005576
Bva08g00374 249 Pfam Expansin C-terminal domain 156 224 IPR007117 -
Bva08g00374 249 Gene3D - 20 149 IPR036908 -
Bva08g00374 249 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 48 153 IPR007112 -
Bva08g00374 249 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 166 244 IPR007117 -
Bva08g00374 249 PANTHER EXPANSIN-B1-LIKE PROTEIN 5 248 - -
Bva08g00374 249 SUPERFAMILY PHL pollen allergen 155 243 IPR036749 -
Bva08g00374 249 Pfam Lytic transglycolase 66 143 IPR009009 -
Bva08g00374 249 SUPERFAMILY Barwin-like endoglucanases 17 152 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00374 Bva-Chr8 1853780 1854699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00374 4 246 Expansin Gene Family AT4G17030 48.387 1.46e-83 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00374 - - gmx:100778424 309.686