Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00373 ATGGGGTTTGTGGAGAATATGCTGCATTCTGAGTCATTAAGAATGGTTACATTAGTCAATAATAATCATTCTGCTGGAAGAAGTACGGACTCAGCAATGGAAGATGGTGATTGCACTTTTCGTGCTCAGTCCATTTCTAAGCGGCGCAAGGTTTCTGCCAATCGTGATTTCCCAGACGGATGTGGACGGTttgcaaagaaaattgatCTAAAACCGAAGGTAGACACTGctagttttaattttggtaaGAGTGCAGTTGTTGAGGATAACGGTGAGGGAACTTCCAAGGGTGAAGTTGAGTCCCAACATTATGAGTTCTCAGAAACTAAAATTCCTACTGAGACTCATGGGCAAGCGGATGACTTCTGTTTGACCAAGGACAGTCCAGTGGTCTCATCCATTCCTGTGGATGGACCTCCTTTAACAAACAATAAACCTGAGGAAGTGCAGTTGGAGGATTTGGACGCACTGGTGGATAAGTTGACAAGGACAGCAGAAGGTGTATGTTGTGACTCCTCTAATGTGTCAAAATTCTTGTCTCAAGATGTCAATCTATCCTGTTCCAGTGGTTGTTTGGACAAGGCCCTAAATAGAAGTTATCTTCCTCGAAGAAGAGTTTCGGCCAACAGAGACTTCCCTCCTTTGTGTGGACGAAATGCTCCACGTCTTGAGAAGGATGAGAGCCCAACCATCAACTTATCTGTGGAGAACAAGTGTACGGGTAGGCAGAATTTGGCTGTAGATGAAAAGCCATTGAGAAATGTAGCAGCCGCTAGTAtaaatgaaatggaaaagaatGTTCTAGACGGAGATGCTTGTGAGGGCAGGCAAGTGGACATCGCTCGAGTTGATTCTGAAGGGAATAATACAGAGGAAGTGAAGGGGCAAGATGTATGTGAATCATCTCCTCAGATGAAATTGCCActggaaaatgaaagagaaaaatgcgTTACAATTTCTAATGAAAGTAATAACCATCGGGTTGAACTGAACTCTAAGGCTgtaatcaaagaagaaaaacggGACATGGTACAGTTTGAGGGAAATTCAGGGAAGGAGATCATAGTTTACCCTGGAGTCCAAGGTCTTGTGACAAAGTCTTCAGATGTATCTGGTCATCGGCGTTGGTTGAAAAGAGACCCTAATGAACTGCAGGTTGCATCAGAGAGGGTGACTGTGTTAGCTCTGATGTCTGAATCAGAATGTCCTTGGAGGCGTGGTAGAGGTTCCTCCAAATATGATTTGATTGGTGGTACAAATGaaagcaaggaaaagaaagtcaaACATTTTCAAAGGCTTGACAAGTCTAAATCTGCTATCAAAACTGAAAATTTACCAAGTCATTCTAGGAAGAAGCCTTTAAAAAAGCAGAAAGGAAGTACTTCTTGTGAAACTACAGGTCAAATGgttttttatgaaaacacTGATGGTCTTGACCCTAATGGAAACATAGAAGAGTTTCGTGTGGTCCCGAGACGACATGATTTCACTGTAAATCTTCCTCCCTTTGGTCATGGTAGTTTGAGTGGGCATGCCTGTGACTCAACTGTGACTAGAAATAAAGTGAGGGAGACGTTGCGCCTGTTTCAAGCACTTTGTAGAAAGTTTTTGCAGGAAGATGAAGCAAAGTTGGGATCTGTTCCTGGAGATAATTCTCGTAGGAGGGTTGATTTACTAGCAGCTAAAATTcttaaggataaaaataaatatgttaacaCAGGCAAGCAGATATTGGGATCTGTCCCTGGAGTTGAAGTTGGTGATGAATTTCAGTATAGAGTGGAGCTTAATATAATTGGCCTACATCGCCTGACTCAAGGTGGCATAGATTATGTGAAGCACAATGGTAAGGTCCTTGCAACTAGTGTTGTTGCATCGGGGGGCTATGCTGATGATCTGGATAATTCAGATGTCTTGGTTTACACAGGGTCAGGGGGAAATGTGATGAACAGTGGTAAAGAACCTGAAGATCAGAAGCTTCAGCGGGGCAATCTTGCTTTGAAGAACAGTTGTGAGGAGAGGAATCCTGTTAGGGTGATACGTGGATCTGATTCAAAAGATGGAAAGTCTAAGAAATATGTTTATGATGGGTTGTATGTAGTTGACAGATATTGGCAGGAAATGGGGCCACATGGTAAGCtggtttttaaatttcagtTACATAGAATTCCAGATCAGCCAGAGCTTGCTTGGAAAGAAGTTAAGAATTCCACAAAGTTCAAAATAAGAGAGGGTCTATGTGTTGATGACATTTCTTTGgggaaagagagaatgaaaatattttccgTCAACACTATTGATGATGAAAAACCTCCACCGTTTCACTACTCTACTAGCATGATATATCCTGATTGGTGCAATCCCATTCCTCCAGAGGGATGTAATTGTACTAATGGATGCTCTGATTCAGAAAAATGTTCTTGTGCTGTCAAAAATGGTGGGGAGATCCCATTCAATCATAATGGAGCAATTGTAGAAGCAAAACCTCTAGTCTATGAGTGTGGTCCTTCTTGCAGGTGCCCTTCAACTTGCCATAACAGAGTTAGCCAACATGgcataaaatttcaacttgaaattttcaaaaccaagACAAGGGGATGGGGTGTCAGATCTCTAAATTCTATCCCTTCAGGAAGTTTTATCTGTGAATATATTGGAGAGCTTCTCGAAGAGAAGGAAGCTGAACAAAGAACTGGTAATGATGAGTATCTGTTTGATATTGGCAATAACTACAGCAATAGTACTCTCTGGGATGGACTATCAATCCTTATGTCTGATCTACAGGCAAGTTCTTGTGAAGTTGTGGGGGATGGTGGCTTCACCATTGATGCAGCCCAGTTTGGTAACGTGGGGAGATTTATCAACCATAGTTGTTCTCCTAATCTTTATGCTCAGAACGTCCTTTATGATCATGATGACAAGAGGATTCCTCATATAATGCTCTTTGCTGCTGAGAACATTCCTCCCTTGCAAGAACTGACTTACGATTACAATTATATCATGGATCAAGTCCGTGATTCTGATGGCAATATAAAGAAGAAGGATTGCTATTGTGGTTCTGCGGAGTGTACTGGTAGGATGTATTG 3086 0.3937 MGFVENMLHSESLRMVTLVNNNHSAGRSTDSAMEDGDCTFRAQSISKRRKVSANRDFPDGCGRFAKKIDLKPKVDTASFNFGKSAVVEDNGEGTSKGEVESQHYEFSETKIPTETHGQADDFCLTKDSPVVSSIPVDGPPLTNNKPEEVQLEDLDALVDKLTRTAEGVCCDSSNVSKFLSQDVNLSCSSGCLDKALNRSYLPRRRVSANRDFPPLCGRNAPRLEKDESPTINLSVENKCTGRQNLAVDEKPLRNVAAASINEMEKNVLDGDACEGRQVDIARVDSEGNNTEEVKGQDVCESSPQMKLPLENEREKCVTISNESNNHRVELNSKAVIKEEKRDMVQFEGNSGKEIIVYPGVQGLVTKSSDVSGHRRWLKRDPNELQVASERVTVLALMSESECPWRRGRGSSKYDLIGGTNESKEKKVKHFQRLDKSKSAIKTENLPSHSRKKPLKKQKGSTSCETTGQMVFYENTDGLDPNGNIEEFRVVPRRHDFTVNLPPFGHGSLSGHACDSTVTRNKVRETLRLFQALCRKFLQEDEAKLGSVPGDNSRRRVDLLAAKILKDKNKYVNTGKQILGSVPGVEVGDEFQYRVELNIIGLHRLTQGGIDYVKHNGKVLATSVVASGGYADDLDNSDVLVYTGSGGNVMNSGKEPEDQKLQRGNLALKNSCEERNPVRVIRGSDSKDGKSKKYVYDGLYVVDRYWQEMGPHGKLVFKFQLHRIPDQPELAWKEVKNSTKFKIREGLCVDDISLGKERMKIFSVNTIDDEKPPPFHYSTSMIYPDWCNPIPPEGCNCTNGCSDSEKCSCAVKNGGEIPFNHNGAIVEAKPLVYECGPSCRCPSTCHNRVSQHGIKFQLEIFKTKTRGWGVRSLNSIPSGSFICEYIGELLEEKEAEQRTGNDEYLFDIGNNYSNSTLWDGLSILMSDLQASSCEVVGDGGFTIDAAQFGNVGRFINHSCSPNLYAQNVLYDHDDKRIPHIMLFAAENIPPLQELTYDYNYIMDQVRDSDGNIKKKDCYCGSAECTGRMY 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00373 1028 Pfam SET domain 866 998 IPR001214 GO:0005515
Bva08g00373 1028 MobiDBLite consensus disorder prediction 429 450 - -
Bva08g00373 1028 SUPERFAMILY SET domain 738 999 IPR046341 -
Bva08g00373 1028 SMART preset_2 748 839 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva08g00373 1028 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 437 1028 IPR025794 GO:0016571
Bva08g00373 1028 SMART PostSET_3 1012 1028 IPR003616 -
Bva08g00373 1028 Pfam Pre-SET motif 751 847 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva08g00373 1028 CDD SET_AtSUVH-like 772 999 - -
Bva08g00373 1028 Gene3D SET domain 742 1028 IPR046341 -
Bva08g00373 1028 SUPERFAMILY PUA domain-like 561 735 IPR015947 -
Bva08g00373 1028 SMART set_7 855 1004 IPR001214 GO:0005515
Bva08g00373 1028 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1 452 1027 - -
Bva08g00373 1028 ProSiteProfiles Pre-SET domain profile. 792 852 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva08g00373 1028 ProSiteProfiles Post-SET domain profile. 1012 1028 IPR003616 -
Bva08g00373 1028 Pfam SAD/SRA domain 578 726 IPR003105 -
Bva08g00373 1028 MobiDBLite consensus disorder prediction 429 461 - -
Bva08g00373 1028 ProSiteProfiles SET domain profile. 855 998 IPR001214 GO:0005515
Bva08g00373 1028 SMART G9a_1 574 726 IPR003105 -
Bva08g00373 1028 ProSiteProfiles YDG domain profile. 579 722 IPR003105 -
Bva08g00373 1028 Gene3D - 560 741 IPR036987 -
Bva08g00373 1028 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 452 1027 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00373 Bva-Chr8 1845398 1849900 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00373 567 1028 EF-hand Containing Proteins AT5G13960 41.309 2.24e-115 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva08g00373 SAD_SRA 1.3e-51 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00373 K11420 - gmx:100776895 1073.92