Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00359 atgaaacgccggcaattttatttctttgaacCTGAGAAAGATGCCGAAGACCCATCCGATGATGCTTGTCTGGTGTGCGCAGATGGGGGAAAGTTAACCTGCTGCGGAAAATGTCCCAACACGGTCCATTCCTTCTGCATGGAGATGGAGATGGATACTGTGGGTGATTGGTTATGCCCTTACTGTGTTTGCAAATATTGCGGGCTCAGAGGGGATGATATTCAAAGCGAGCATTTGATCAATTGTCCCCAGTGTGacaaaaaatTTCATCGAGCATGcttaattgaagaaaaagaaaaagaaggcgTAAACCTTAACTGTTGGAAGTCGTATTGCGAGCAGAGCTGCAGAAAGATCCATGAGAAACTGGAGAGCTTGGTTGGAGTTAGAAACAAGTTAGACGACAGATATTGTTGGCAAATTATTCGAACCACGAATgacaataataatgataagcTGCACCACAAGATGGAGTGTAATGCCAAAGTAGCATTGGCCTGGAATCTGATTGATGAATCGTTCGAGAGCATTACTGATAGATTAACAGGCATCGATGTGATCCAAAGAGTAATGTACAGCTGCGGATCAAACTTAACCAGGACCAATTTTAGACGCTTTTATACATTCAttatagagaaagagaaagaggacgAGATCATATGTGCTGCATGCATAagAGTTCACGGGAGAAGAATTGCCGAAATGCCTTTCATAACCACGGCAGAGAACTACAGGAGGCAAGGAATCTGTGGCATGTTACTGGCCGTAATAGAATCGATCCTGTGCAGTCTTAAAGTGGAGAAACTTATCCTGCCCGCAGTTATGGAAGTTCAGGCTATGTGGAAAAAATATGGTTTCACCGAGTTAGAAAGTGAGTTGACGAGAGAAATCACCTGCTACAATATCTTAACGTTTCCTGGTTTGGTGAGGCTCCACAAGGACCTACGCCAACATATTACGGGTGCTCGTGATTATGGCAACAACCATAATGATGGACCGCAGAGACCATTTCTTGACTTGAATGTGGAGCCTCCTCCCGAAGATGACATATA 1052 0.4002 MKRRQFYFFEPEKDAEDPSDDACLVCADGGKLTCCGKCPNTVHSFCMEMEMDTVGDWLCPYCVCKYCGLRGDDIQSEHLINCPQCDKKFHRACLIEEKEKEGVNLNCWKSYCEQSCRKIHEKLESLVGVRNKLDDRYCWQIIRTTNDNNNDKLHHKMECNAKVALAWNLIDESFESITDRLTGIDVIQRVMYSCGSNLTRTNFRRFYTFIIEKEKEDEIICAACIRVHGRRIAEMPFITTAENYRRQGICGMLLAVIESILCSLKVEKLILPAVMEVQAMWKKYGFTELESELTREITCYNILTFPGLVRLHKDLRQHITGARDYGNNHNDGPQRPFLDLNVEPPPEDDI 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00359 350 ProSiteProfiles Zinc finger PHD-type profile. 20 65 IPR019787 -
Bva08g00359 350 SMART PHD_3 22 63 IPR001965 -
Bva08g00359 350 CDD NAT_SF 214 271 - -
Bva08g00359 350 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 77 IPR013083 -
Bva08g00359 350 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 204 290 IPR016181 -
Bva08g00359 350 MobiDBLite consensus disorder prediction 322 350 - -
Bva08g00359 350 SUPERFAMILY FYVE/PHD zinc finger 12 67 IPR011011 -
Bva08g00359 350 PANTHER PHD FINGER PROTEIN 12 2 318 IPR042163 GO:0003714|GO:0045892
Bva08g00359 350 Gene3D - 168 296 - -
Bva08g00359 350 PANTHER GNAT FAMILY ACETYLTRANSFERASE 2 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00359 Bva-Chr8 1783546 1785285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00359 15 315 PHD Transcription Factor Family AT4G14920 40.850 8.47e-79 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00359 - - lang:109331897 354.755