Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00355 ATGTACGGGCAGAGTAGCACCCAGTCCGATTTAGCCCTTTTGGACTCCATTCGGTGCCACTTGCTGGGCGATTCTGATGCTCGATTAACCAATTCGAGTAACGCTCCGTTTTACTCTCGGAGCTCCAGTTTCGGCAGCTTGTACCCTTGCTTGAGTGATAATTGGGGAGAGTTGCCACTCAAAGAGGATGATTCCGAGGACATGGTACTCTACGGCGTACTGCGCGATGCTGTCAATGTTGGATGGGTCCCATCCCTTGATGTTGCTTCTCCAGATCCAGATAGCTGCTCCTCCGGCTTGTCCACTGTGACAGTTAAATCGGAGCCCGATGTATCGCCGGTCGTGCTTAGCCCTCCGGAGATTGTTTCGGCTCCTTTTGTAATTCAGCAAGAGAAAACTGTACCCGCGGCTGCGCCGTCAAAGGGGAAGCACTACCGGGGCGTGAGGCAGCGGCCGTGGGGAAAATTCGCGGCCGAGATCCGTGACCCGGCTAAAAATGGGGCAAGGGTTTGGCTTGGGACATTTGAAACAGCCGAAGACGCCGCGCTGGCTTATGATCGAGCCGCTTACAAAATGAGGGGCTCGCGAGCTCTACTGAATTTCCCGCTCCGGGTTAACTCGGGCGAGCCTGACCCGGTGCGAGTGACTTCGAAGAGGTGTTCGCCGGAGCCTTCTTCTTCGTCATCGGAGAGCGGATCGCccaagagaaggaagaaggtGGTACCAACGGCTCAAGCCGGAATGAAAACGGGACAAGTGGCAAGTCAAGTGGCATCGTGTACGCGTGGAGAACAGCTATTGGTTAGCTTATA 812 0.5394 MYGQSSTQSDLALLDSIRCHLLGDSDARLTNSSNAPFYSRSSSFGSLYPCLSDNWGELPLKEDDSEDMVLYGVLRDAVNVGWVPSLDVASPDPDSCSSGLSTVTVKSEPDVSPVVLSPPEIVSAPFVIQQEKTVPAAAPSKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYKMRGSRALLNFPLRVNSGEPDPVRVTSKRCSPEPSSSSSESGSPKRRKKVVPTAQAGMKTGQVASQVASCTRGEQLLVSL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00355 270 Pfam AP2 domain 144 194 IPR001471 GO:0003700|GO:0006355
Bva08g00355 270 PRINTS Ethylene responsive element binding protein signature 168 184 IPR001471 GO:0003700|GO:0006355
Bva08g00355 270 PRINTS Ethylene responsive element binding protein signature 145 156 IPR001471 GO:0003700|GO:0006355
Bva08g00355 270 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1-RELATED 29 256 - -
Bva08g00355 270 CDD AP2 143 202 IPR001471 GO:0003700|GO:0006355
Bva08g00355 270 Gene3D AP2/ERF domain 143 205 IPR036955 GO:0003700|GO:0006355
Bva08g00355 270 ProSiteProfiles AP2/ERF domain profile. 144 202 IPR001471 GO:0003700|GO:0006355
Bva08g00355 270 PANTHER DNA-BINDING DOMAIN 29 256 IPR044808 GO:0003700|GO:0009873
Bva08g00355 270 SUPERFAMILY DNA-binding domain 144 204 IPR016177 GO:0003677
Bva08g00355 270 MobiDBLite consensus disorder prediction 208 252 - -
Bva08g00355 270 SMART rav1_2 144 208 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00355 Bva-Chr8 1767778 1768871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00355 1 268 AP2-EREBP Transcription Factor Family AT4G17500 53.684 9.71e-88 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bva08g00355 AP2 6.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00355 K09286 - qsu:112036215 337.421