Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00354 ATGGCGAACCCAGTTGAAGTTTCAGTCCTCAAACAGAtaaaatttcatcttcttGGAGAACTCTCTCCCGTGGGGGCCTTCTCCGCTGCCCTTTGCAGCTCTGCCACCGAAAAGCTATGGTTTGACCAAGCAAACCTAGCAGATTCAACCTCCCAATCTGACTCTCTCTGTTCCCAATCTTCAAGCTGCGATTCTTCCATTGATGTGTCTGATTTCTTCACTGAAATCTTGGATTTCTCAACCAATTCCATGCCTTCCGCAGAAAATCAGGTTAATCTGTTTGAATTCGAGTCAAAATCCCAAGTGATTGACCTGTCAACGCCAAAAATGGAGACAGAAGCTTCGCAGTTGAACAACAGTTTCTCCCAATTCGAATCAAATTCACCGTCCAATAGTGATATCTTCGAGTTCCAACCAAGGCCTCaaacaatagagaagaaagatcAATCGAATCGGAAACCATCGTTGCAAATCTCGCTTCCAAAGAAAACCGAATGGATCCAATTTGGAAGTTCGGATCAGCAACAAGAGGTTCCAGAAATATTCGAgcagaaaaattcaaatcctGTAGAAAAGAAGCACTATAGAGGGGTTCGACAGAGGCCATGGGGCAAATTCGCTGCCGAGATCCGTGACCCGAATAAACGGGGATCCAGGGTTTGGCTTGGCACTTTTGACACAGCTATCGAGGCCGCCAAAGCCTACGACCGAGCTGCCTTTAAACTCCGTGGCTCCAAAGCCATCCTCAACTTCCCTCTCGAAGCCGGCAAATCGATTTCCGAATCCACTTCCGTTAACGGCGCTGACGGTAGAAAACGTAGCCGTGAAGATGACGACGGAGAGGCACAAGTGGAAGTAAAGACGGTGGTTAAGAAGGAGAAAACGGAAGAATACGACGTCAACCGTCTAAGGGACATCCCATTAACGCCGTCTACTTGGGCATTAATCTGGGAAAGTGATGCCAAAGGAATTTTTAACATCCCACCGTTATCACCGTTATCTCCCCACCCGGCTTTGGGTTATCCACAACTTATGGTCGTATG 1043 0.4535 MANPVEVSVLKQIKFHLLGELSPVGAFSAALCSSATEKLWFDQANLADSTSQSDSLCSQSSSCDSSIDVSDFFTEILDFSTNSMPSAENQVNLFEFESKSQVIDLSTPKMETEASQLNNSFSQFESNSPSNSDIFEFQPRPQTIEKKDQSNRKPSLQISLPKKTEWIQFGSSDQQQEVPEIFEQKNSNPVEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLEAGKSISESTSVNGADGRKRSREDDDGEAQVEVKTVVKKEKTEEYDVNRLRDIPLTPSTWALIWESDAKGIFNIPPLSPLSPHPALGYPQLMVV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00354 347 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 3 332 - -
Bva08g00354 347 SUPERFAMILY DNA-binding domain 194 253 IPR016177 GO:0003677
Bva08g00354 347 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 332 - -
Bva08g00354 347 MobiDBLite consensus disorder prediction 268 282 - -
Bva08g00354 347 SMART rav1_2 194 258 IPR001471 GO:0003700|GO:0006355
Bva08g00354 347 CDD AP2 193 252 IPR001471 GO:0003700|GO:0006355
Bva08g00354 347 PRINTS Ethylene responsive element binding protein signature 234 254 IPR001471 GO:0003700|GO:0006355
Bva08g00354 347 PRINTS Ethylene responsive element binding protein signature 195 206 IPR001471 GO:0003700|GO:0006355
Bva08g00354 347 ProSiteProfiles AP2/ERF domain profile. 194 252 IPR001471 GO:0003700|GO:0006355
Bva08g00354 347 MobiDBLite consensus disorder prediction 260 282 - -
Bva08g00354 347 Pfam AP2 domain 194 244 IPR001471 GO:0003700|GO:0006355
Bva08g00354 347 Gene3D AP2/ERF domain 193 254 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00354 Bva-Chr8 1758055 1759281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00354 1 347 AP2-EREBP Transcription Factor Family AT5G47230 45.634 3.35e-69 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva08g00354 AP2 4.6e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00354 K09286 - gmx:100808173 305.449