Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00350 ATGCGTATAGAGGAATTGAAGGGGGAGGAGGTGGAAGGTGGAGAGGAAGGACAATCATACGTCGGGGATGGTGATTCTGGCGGAGCAAGTTTTCTTGGGTCTGATGCTAAAAGGGTTTTGGTTGGAGCAGGGGCTCGTGCACTCTTCTATCCCACTCTGCTTTACAACGTCGTCAGGAATAAGATTCAGGCGGAGTTTCGGTGGTGGGATAAGGTTGATGAGTTCATATTATTAGGTGCTGTTCCATTCCCAGTCGATGTTCCCCGCTTAAAGGAGCTTGGTGTTCGTGGAGTCATTACATTGAATGAAGCGTACGAGACTTTGGTTCCAACCACCCTATATCACGCTCATGGAATTGAGCATCTAGTGATTCCTACTAGGGACTACTGTTTTGCTCCATCATTGCGTGACATATGCCATGCTGTGGACTTCATTCATGAAAATGCGATGTCTGGACGAACTACATATGTTCACTGCAAAGCTGGACGTGGTCGCAGCACAACAATTGTAATCTGTTACCTGGTGCATTACAAGTTGATGACGCCTGACTCTGCATACGATTATGTAAAATCAATCCGGCCAAGGGTTCTTTTAGCATCGTCACAGTGGAAAGCTGTCCACGAATATTACCATCATATGGTGAGGAGGATTGTCACCCGTGCTCCCATGGCCAATTTAGTGGTGAGAGCATCCGAGGCAACAGCAGCTTCGCAGGGCCTTGTCATATTTGATGATTCTTCTGTAGTTGTGGTAACAGAGTCTGATCTCGAAGGATACGACCCAAGAATTCCATCAGGTACTGCGGCAAATAAAATATGGACAGATTTAAGCATCGTTTATCGTGTCCGAGTTTCGGGAGAGGCGGCACTAGCAAGAATATCATGTCTATGGTTGCGATATCGGACACATCAGAAGATTTCTGGGGAGAAATTGAGCCGGGAGAGTAGCTGCTCACTAAAAACTAGTCACTTGGATAGCATTAGCGTTGATATCCAAGTTTACTG 1004 0.4641 MRIEELKGEEVEGGEEGQSYVGDGDSGGASFLGSDAKRVLVGAGARALFYPTLLYNVVRNKIQAEFRWWDKVDEFILLGAVPFPVDVPRLKELGVRGVITLNEAYETLVPTTLYHAHGIEHLVIPTRDYCFAPSLRDICHAVDFIHENAMSGRTTYVHCKAGRGRSTTIVICYLVHYKLMTPDSAYDYVKSIRPRVLLASSQWKAVHEYYHHMVRRIVTRAPMANLVVRASEATAASQGLVIFDDSSVVVVTESDLEGYDPRIPSGTAANKIWTDLSIVYRVRVSGEAALARISCLWLRYRTHQKISGEKLSRESSCSLKTSHLDSISVDIQVY 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00350 334 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 60 214 IPR029021 -
Bva08g00350 334 CDD PTPMT1 68 210 IPR044596 GO:0004721
Bva08g00350 334 PANTHER - 1 334 - -
Bva08g00350 334 Pfam Dual specificity phosphatase, catalytic domain 90 210 IPR000340 GO:0008138|GO:0016311
Bva08g00350 334 SMART dsp_5 71 212 IPR020422 GO:0006470|GO:0008138
Bva08g00350 334 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311|GO:0016791
Bva08g00350 334 MobiDBLite consensus disorder prediction 1 24 - -
Bva08g00350 334 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8-RELATED 1 334 - -
Bva08g00350 334 Gene3D Protein tyrosine phosphatase superfamily 68 218 IPR029021 -
Bva08g00350 334 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 215 IPR020422 GO:0006470|GO:0008138
Bva08g00350 334 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 204 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00350 Bva-Chr8 1735439 1738956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00350 1 334 Protein tyrosine phosphatase (PTP) family AT2G35680 57.429 8.08e-132 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00350 - - gmx:100790413 499.975