Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00337 ATGGGTGTTTACGATATGTATCGGAGCTATGGCGTAAGAAACGATCTGAAGTCCTCAGATTCTTGCAGAGGGTTCGTTGATTGGGTTACAAGGCTAATCAGgGGTATGTCCTTTTTCGGGTTTGGAGGGGTGGCTGAAAGAGGCCAGTTCCCAAAGCTGGGTGGCCTTAGAGTTCTCAATTCATATTCTGTGAACCAGGACTCAACTTACAAGTACTATGAGGTAATCCCGGTAGATGTCGCCCACAAATATACAGGTCCCAACGATCTTTCTACTGGCACCCCTCACCtctatgtgtgtgtgtgtgcttGTCTGTGTGTTTACGTGTCCAAACTTGGGGGTGATATACCTGTATACGACCCTTACTTTCGTCAAAAAATACAGGAAATGCCAACGGCAAGACAAATGACCAGTACAGAATTATTGGGAGTAAATGAGCAATA 443 0.4312 MGVYDMYRSYGVRNDLKSSDSCRGFVDWVTRLIRGMSFFGFGGVAERGQFPKLGGLRVLNSYSVNQDSTYKYYEVIPVDVAHKYTGPNDLSTGTPHLYVCVCACLCVYVSKLGGDIPVYDPYFRQKIQEMPTARQMTSTELLGVNEQ 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00337 147 Gene3D Ribosomal protein l15e 41 91 IPR024794 GO:0003735|GO:0005840
Bva08g00337 147 Pfam Ribosomal L15 44 84 IPR000439 GO:0003735|GO:0005840|GO:0006412
Bva08g00337 147 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 44 88 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00337 Bva-Chr8 1663120 1667075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00337 44 82 Cytoplasmic Ribosomal Protein Gene Family AT4G17390 69.231 1.56e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00337 K02877 - thj:104815501 62.3882