Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00319 ATGGCTCCTCTTTTCGTCTATATGCTTTTGCTTTGCATCTGCGTACTTGATGCACGAATGATCTCGTGCACAACATACAGTGATAACACGCCCAAATTTGTCTCTTCCGCAGACCCACCCCATCACCAACACCGGTGGATCGGACCCATCGGCCACCGCGTAATCACCGTCGACGTTAACGGCGGTGGCCATTTTCAGTCCGTCCAAGCGGCCGTCGATTCAGTTCCAGAGAACAATAGGATGAACGTCCTTGTTCAAATTAGTGCAGGCTGCTACAAAGAGAAGGTGGTGGTGCCGACGACGAAGCCGTACATAACGTTTCAGGGAGCGGGAAGGGATGTGACGGTGATAGAATGGCACGACCGAGCGAGTGACCCTGGTCCTAATGGACAGCAGCTGCGTACTTACAGAACTGCTTCTGTTACTGTTTTTGCGAATTACTTCTCTGCTAGGAATATCAGCTTCAagAACACAGCACCAGCACCAATGCCGGGAATGCAAGGATGGCAAGCGGTGGCATTTCGAATATCTGGAGACAAAGCATACTTCTCTGGGTGTGGATTCTACGGTGCGCAGGACACCCTTTGCGACGACGCCGGCAGGCATTATTTCAAGGAATGCTACGTTGAGGGCTCCATAGATTTCATCTTTGGGAATGGCAGGTCCATGTACAAGGATTGTGAGCTGCACTCAATAGCGACGAGGTTCGGGTCCATAGCTGCGCAATATAGGAAAGTGCCATACGATAAAACAGGGTTCGCATTCGTAAACTGTAGGGTGACGGGTACAGGCCCGCTATATGTGGGTCGGGCTATGGGCAAGTACTCAAGAATTGTTTACGCCTATACATACTTCGACGACATCGTTGCTCACGGTGGCTGGGATGATTGGAAGTGGAACCATGTCAACGAGAACAGGACTGTGTTTTTGGGAGTTTACAAGTGTTGGGGTCCAGGAGCCGAGGCAGTGCGAGGGGTCTCGGGGGCCCGGGAGTTGGATTTTGATTCCGCACACCCATTTCTTGTCAAGAGTTTCGTTAACGGGAGACACTGGATTGCACCCTCTGACGCTTA 1073 0.5135 MAPLFVYMLLLCICVLDARMISCTTYSDNTPKFVSSADPPHHQHRWIGPIGHRVITVDVNGGGHFQSVQAAVDSVPENNRMNVLVQISAGCYKEKVVVPTTKPYITFQGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMQGWQAVAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYVEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQYRKVPYDKTGFAFVNCRVTGTGPLYVGRAMGKYSRIVYAYTYFDDIVAHGGWDDWKWNHVNENRTVFLGVYKCWGPGAEAVRGVSGARELDFDSAHPFLVKSFVNGRHWIAPSDA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00319 357 SUPERFAMILY Pectin lyase-like 52 354 IPR011050 -
Bva08g00319 357 PANTHER PECTINESTERASE 68-RELATED 28 356 - -
Bva08g00319 357 ProSitePatterns Pectinesterase signature 2. 209 218 IPR033131 -
Bva08g00319 357 Pfam Pectinesterase 55 348 IPR000070 GO:0030599|GO:0042545
Bva08g00319 357 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 28 356 - -
Bva08g00319 357 Gene3D - 51 356 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00319 Bva-Chr8 1561970 1564498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00319 4 357 Carbohydrate Esterase AT5G47500 71.549 0.0 536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00319 08 1561970 1564498 Bva11g01981 11 16869496 16871935 BWGD
Bva08g00319 08 1561970 1564498 Bva08g00319 08 1561970 1564498 ECH