Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00295 ATGGACTCCAATCACGGTTCTCCTGTTCCCATCGGCAAGTCTAGACTAGGAATCTTTTCTAGTCTATTAACTTGCTCCCAGCAAGATCAGCCAGTGTCTCCCGGTAAGTATACAAGAAGCGGGTCCAGGAAAAGTGCAGCTAGTCTTGATGATGTTCGCTCCAATGGATGGTTGGATGCCATGAAGGCTTCCTCACCCCCAAGGAAGAAGCTTCTTAAAGGTTCTAACATTCAGGTTGCTTCCATAGACCATGAAACCGAAGATTATCTTTCCTGGATGCTTGACTACCCATCAGCACTCGAATGCTTTGACAAAATTGTTGACCGTGctaaaaataacaagattGCAATATTTCTAGACTATGATGGCACTCTCTCACCAATCGTAGACAATCCAGATTGCGCTTTTATGTCCGAATCTATGCGGGCAACAGTGAGAAGTGTGGCAAAATATTTTCCCACGGCAATCATTAGCGGAAGAAGCCGCGACAAGGTTTTTGACTTAGTTAAACTAACGGAACTGTACTATGCTGGAAGCCACGGTATGGACATTATTGGCCCTGCCTGTGATTCTCTTTCTAAAGTCCATCCGGACTGTGTTAAATCTAGGGACGATCAGGGAAAGGAAATAACACTCTTTCAACCTGCAAGAGAATTTATCTCTTTGATCGACCAGGTTTTTAAAACCCTGGTTGAGATTACCAAAGACATCAAAGGCGCAAAAGTTGAAAATCACAAGTTTTGCGTTTCTGTACATTACCGTAATGTAGAGGAGAATAATTGGACTGCTATTGGACAGCGTGTCCATGACGTCGTAAAAGATTACCCTCGTTTACGTTTAACTCACGGGCGGAAGGTTTTAGAAGTCCGTCCCATGATTGATTGGAATAAAGGAAAAGCAGTTGAGTTCTTACTTGAATCTCTAGGGTTCACTGACAGGGATAGTGTGCTTCCTATCTACATTGGAGATGATAAGACTGACGAAGATGCTTTCAAGGTGCTGCGAGAGAGCCAACAAGGTTATGGTATTTTGGTTTCGTCAGTCATGAAAGAAAGCAACGCCTTGTACTCTCTACGCGACACAAATGAGGTCATGAAATTTCTACAACTATTAGTGAATTTGAAGAGGCAAGAAGGAAGGACGCGGGATAGACCCTA 1157 0.4304 MDSNHGSPVPIGKSRLGIFSSLLTCSQQDQPVSPGKYTRSGSRKSAASLDDVRSNGWLDAMKASSPPRKKLLKGSNIQVASIDHETEDYLSWMLDYPSALECFDKIVDRAKNNKIAIFLDYDGTLSPIVDNPDCAFMSESMRATVRSVAKYFPTAIISGRSRDKVFDLVKLTELYYAGSHGMDIIGPACDSLSKVHPDCVKSRDDQGKEITLFQPAREFISLIDQVFKTLVEITKDIKGAKVENHKFCVSVHYRNVEENNWTAIGQRVHDVVKDYPRLRLTHGRKVLEVRPMIDWNKGKAVEFLLESLGFTDRDSVLPIYIGDDKTDEDAFKVLRESQQGYGILVSSVMKESNALYSLRDTNEVMKFLQLLVNLKRQEGRTRDRP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00295 385 Gene3D - 220 384 IPR023214 -
Bva08g00295 385 Gene3D - 115 201 IPR023214 -
Bva08g00295 385 Pfam Trehalose-phosphatase 118 361 IPR003337 GO:0003824|GO:0005992
Bva08g00295 385 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 116 335 IPR006379 -
Bva08g00295 385 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 7 380 IPR044651 GO:0004805|GO:0005992
Bva08g00295 385 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED 7 380 - -
Bva08g00295 385 CDD HAD_TPP 116 366 - -
Bva08g00295 385 MobiDBLite consensus disorder prediction 28 48 - -
Bva08g00295 385 SUPERFAMILY HAD-like 116 375 IPR036412 -
Bva08g00295 385 TIGRFAM T6PP: trehalose-phosphatase 214 372 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00295 Bva-Chr8 1437401 1441691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00295 111 371 Trehalose Biosynthesis Gene Families AT1G70290 25.993 2.12e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00295 K01087 - tcc:18606311 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00295 08 1437401 1441691 Bva08g00295 08 1437401 1441691 ECH