Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00291 ATGTCATCCTCTTCAACTACCTTATCGCTGGACCACCTTCCCCCTTCCGAGCAGCTTTGTTATGTCCACTGCAACATTTGTGACACCGTGCTTGCTGTAAGCGTTCCCTGCACAAGCTTGTTCAAAACCGTGACTGTCCGATGCGGCCATTGCACCAATCTCCTGCCAGTCAACATGCGTGGATTACTTCTGCCATCGACAAATCAATTTCACTTGGGTCACTCTTTATTCTCTCCATCCCATAACCTCCTGGAGGAGATGCCAAATTCATCCCCAAATTTCCTGATCAACCAGACCAACTCTTCAAATGACTTCTCTATGCCTACCAGGACTGCAGTTGATGAGCTTCCTCGGCCACCGGTCATAAACAGACCTCCAGAGAAGAGACAAAGAGTCCCCTCCGCCTACAACCGCTTCATTAAGGACGAGATCCAACGCATCAAGTCTGCCAATCCCGATATAACCCACAGAGAAGCCTTCAGTGCAGCAGCCAAGAAtTGGGCCCACTTCCCACACATCCACTTTGGCCTCATGCCTGATCAGACAGCGAAGAAGACAAATGTGCGCCAGCAGGAAGGAGGGGACGTTCTGATGAAAGATGGGATTTTTGCTTCGGCCAATGTTGGTGTTTCTCCCTACTA 641 0.4992 MSSSSTTLSLDHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHLGHSLFSPSHNLLEEMPNSSPNFLINQTNSSNDFSMPTRTAVDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSANPDITHREAFSAAAKNWAHFPHIHFGLMPDQTAKKTNVRQQEGGDVLMKDGIFASANVGVSPY 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00291 213 Gene3D High mobility group box domain 122 186 IPR036910 -
Bva08g00291 213 PANTHER PROTEIN YABBY 6-RELATED 1 211 IPR006780 GO:0007275
Bva08g00291 213 Pfam YABBY protein 15 177 IPR006780 GO:0007275
Bva08g00291 213 MobiDBLite consensus disorder prediction 109 131 - -
Bva08g00291 213 SUPERFAMILY HMG-box 121 170 IPR036910 -
Bva08g00291 213 CDD HMG-box 131 167 - -
Bva08g00291 213 PANTHER PROTEIN YABBY 4 1 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00291 Bva-Chr8 1414985 1417700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00291 26 211 C2C2-YABBY Transcription Factor Family AT4G00180 58.852 5.13e-64 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bva08g00291 YABBY 6.8e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00291 K25796 - jre:109011373 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00291 08 1414985 1417700 Bva08g00291 08 1414985 1417700 ECH