Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00289 ATGAACACGTTTTCACATGTTCCACCAGGCTTCCGGTTCCATCCTACTGATGAAGAGCTTGTTGATTACTACCTCAGGAAAAAAGTAGCTGGTAAAAGGATCGATCTAGATGTTATCAAAGATGTCgatctttataaaattgagCCATGGGATCTTCAAGAATTATGCAAACTTGGCGTTGAAGAACAAAGTGATTGGTATTTCTTTAGCCATAAAGATAAGAAGTACCCAACTGGTACTCGCACCAACAGAGCTACAAAAGCAGGATTTTGGAAAGCTACAGGAAGAGACAAGGCCATCTATGCTAGGAATTGCCTGATTGGCATGAGAAAGACTTTGGTGTTTTACAAAGGCCGAGCTCCAAATGGACAAAAATCCGACTGGATTATGCATGAATATCGGCtcgaaacaaatgaaaatgcaaCTCCTCAGGAAGAAGGCTGGGTTGTATGTAGAGTGTTCAAGAAGAGGATGACAACAGTTCGGAAAATGGGAGAGTACGATTCACCCTGTTGGTATGATGACCAAGTTTCCTTCATGCAAGATCTTGAATCCCCAAGGCGAATTTCTAACTCTTCTTATGCATCATACCACCAACACTACCAATGCAAGCAGGAGCTGGAATTCCAATACAACATACCACAGGATGCTTTCCTCCAACTTCCTCAGCTTGAAAGCCCTAAACTTCCCCAATCAGCCACAAGTTTGAGTTGCAACTCGGTTATCCCTTATGGGTATGATAGGAACACCAATGGCAGCACTCTGCAATCCTCATCACTCACGCAAGAAGAACACATGCAACAATACCACCAACAAAGTCTGAACTCTCTTCATGGTAGCCTTGATCAAGCCGTGGATCAGGTGACTGATTGGCGAGTACTTGACAAATTTGTTGCTTCTCAGCTCAGTCATGACCAAGATGCTTCCAAGGAAAACAGTTATTCTTCAAATGCAGCTATCCTCAATGTGGCTCAACAAATTACTCTTCTAGCAAATGAATCCAAAAGGCCACAGGAATATGCCTCCACATCCACCTCCAGTTGCCAAATTGACCTGTGGAAGTG 1064 0.4211 MNTFSHVPPGFRFHPTDEELVDYYLRKKVAGKRIDLDVIKDVDLYKIEPWDLQELCKLGVEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYARNCLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENATPQEEGWVVCRVFKKRMTTVRKMGEYDSPCWYDDQVSFMQDLESPRRISNSSYASYHQHYQCKQELEFQYNIPQDAFLQLPQLESPKLPQSATSLSCNSVIPYGYDRNTNGSTLQSSSLTQEEHMQQYHQQSLNSLHGSLDQAVDQVTDWRVLDKFVASQLSHDQDASKENSYSSNAAILNVAQQITLLANESKRPQEYASTSTSSCQIDLWK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00289 354 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 339 - -
Bva08g00289 354 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 339 - -
Bva08g00289 354 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Bva08g00289 354 MobiDBLite consensus disorder prediction 335 354 - -
Bva08g00289 354 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Bva08g00289 354 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Bva08g00289 354 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00289 Bva-Chr8 1398719 1402690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00289 1 354 NAC Transcription Factor Family AT1G12260 56.883 6.39e-145 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva08g00289 NAM 3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00289 - - tcc:18606319 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00289 08 1398719 1402690 Bva11g02009 11 17027465 17031400 BWGD
Bva08g00289 08 1398719 1402690 Bva08g00289 08 1398719 1402690 ECH