Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00286 ATGGCGACAGAGTCTTTGAGAGTGATGGCAGCGTCAGCTTCGTCTCTCTGCAATTTCAATGGGTCTCAGAGGAGGCCAACCCCTCTCTCTCCAATTCTCTTCAAGGGCGTTCGTTCTCAATCCTCACACTCTCGTAtttcatcttctctttctcaatTCTTTGGAAGTACTCGAATCAGctccaaaatttcaaagctTTCCCTCTTACGCCAACAGAGCAGAAGAAACTTATCTGTATTCGCCATGGCTGCTGAAgACACAAAGCGTGCTGTTCCATTGAAGGATTATCGCAACATTGGCATCATGGCCCACATAGATGCTGGAAAGACAACTACGACCGAGCGAGTTCTCTATTACACAGGAAGAAACTACAAAATAGGAGAGGTACACGAGGGTACTGCAACAATGGACTGGATggaacaagaacaagaacgAGGGATTACCATAACTTCTGCTGCGACCACTACATTTTGGGATAAGCATCGGATCAACATTATTGATACTCCTGGTCATGTGGACTTCACCCTAGAAGTGGAGCGGGCTCTTAGGGTGTTGGATGGAGCTATATGCCTGTTTGACAGTGTAGCTGGTGTAGAACCACAATCAGAAACCGTGTGGAGGCAAGCTGATAAATATGGGGTCCCTAGAATATGTTTTGTAAATAAGATGGACCGTCTTGGAGCAAACTTTCTCCGAACAAGAGACATGATAGTAACAAATTTGGGTGCTAAACCACTTGTAATTCAATTACCAGTTGGGGCGGAGGATAACTTTAAGGGAATTGTTGATCTTGTAAAGATGAAGGCTATAATTTGGTCCGGGGAAGAGTTGGGTGCCAAGTTTGTGTATGAAGATATCCCGGATGATCTTCAAGAGCTGGCTCAGGATTACCGATCTCAGATGATAGAAACGATAGTTGATTTGGATGATCAAGCTATGGAGAGCTACTTAGAAGGAATTGAACCAGACGAAGAAACTATCAAAAAACTAATTAGGAAGGGAACCATATCAGCCAGTTTTGTGCCAGTACTTTGTGGCTCAGCTTTCAAAAACAAGGGGGTCCAACCGTTGCTTGATGCTGTTGTGGACTATCTACCTTCACCACTTGATTTGCCTCCAATGAAGGGAACCGATCCAGAAAATCCAGAAACAATAATAGAAAGGACAGCAAGTGATGATGAACCATTTTCTGGACTAGCCTTTAAGATCATGAGTGATCCATTTGTAGGTTCCCTTACATTTGTCAGGGTGTATGCCGGAAAGCTAACTGCTGGATCTTATGTACTCAAtgcaaacaaaggaaaaaaggagaGAATTGGTAGACTTCTAGAAATGCATGCAAACAGCAGAGAGGATGTCAAAGTAGCTTTAACAGGTGATATTATTGCTCTTGCCGGTTTAAAAGATACTATTACTGGTGAAACACTGTGTGACCCTGATAGTCCTGTCTTGCTTGAGCGTATGGACTTCCCTGATCCTGTTATAAAGGTTGCAATTGAACCAAAGACTAAAGCTGATGTTGACAAGATGGCAAATGGTTTAATCAAGCTTGCCCAGGAAGACCCTTCTTTCCACTTCACCAGGGATGAGGAGATCAACCAGACAGTGATTGAAGGAATGGGAGAATTGCATCTTGAAATTATTGTTGACCGACTGAAGAGAGAATTTAAGGTGGAAGCTAATGTTGGTGCTCCCCAAGTAAACTACAGGGAAAGCATTTCCAAAGTTTCAGAAGTGAAATATGTTCACAAAAAACAGTCTGGTGGACAAGGTCAGTTTGCTGATATCACTGTACGGTTTGAACCAATGGAGGCTGGTAGTGGATATGAGTTCAAGAGTGAAATCAAAGGAGGTGCAGTACCAAAAGAATACGTTCCAGGGGTGATGAAAGGATTGGAAGAGTGTATGAGTAATGGTGTGCTTGCTGGCTTTCCAGTCGTTGATGTACGTGCAGCACTTGTAGACGGCTCTTACCATGATGTAGATTCAAGTGTCCTGGCATTCCAGTTGGCAGCAAGAGGAGCTTTTAGGGAGGGAATGAGGAAAGCTGGACCAAGGATGCTTGAACCTATAATGAAAGTTGAAGTTATAACTCCCGAAGAACATCTAGGTGACGTAATTGGTGATCTCAACTCAAGAAGAGGTCAGATCAACAGCTTTAGTGACAAGCCTGGCGGACTCAAGGTGGTTGATGCCCTGGTACCTCTTGCCGAGATGTTTCAGTATGTCAGTACACTTAGAGGGATGACCAAGGGACGTGCATCCTACACGATGCAGTTATCCAAGTTTGATGTTGTACCTCAGCACATTCAGAACCAACTTACTTCAAAGGAGCAAGAAGTTGCTGCTTA 2351 0.4245 MATESLRVMAASASSLCNFNGSQRRPTPLSPILFKGVRSQSSHSRISSSLSQFFGSTRISSKISKLSLLRQQSRRNLSVFAMAAEDTKRAVPLKDYRNIGIMAHIDAGKTTTTERVLYYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFLRTRDMIVTNLGAKPLVIQLPVGAEDNFKGIVDLVKMKAIIWSGEELGAKFVYEDIPDDLQELAQDYRSQMIETIVDLDDQAMESYLEGIEPDEETIKKLIRKGTISASFVPVLCGSAFKNKGVQPLLDAVVDYLPSPLDLPPMKGTDPENPETIIERTASDDEPFSGLAFKIMSDPFVGSLTFVRVYAGKLTAGSYVLNANKGKKERIGRLLEMHANSREDVKVALTGDIIALAGLKDTITGETLCDPDSPVLLERMDFPDPVIKVAIEPKTKADVDKMANGLIKLAQEDPSFHFTRDEEINQTVIEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKVSEVKYVHKKQSGGQGQFADITVRFEPMEAGSGYEFKSEIKGGAVPKEYVPGVMKGLEECMSNGVLAGFPVVDVRAALVDGSYHDVDSSVLAFQLAARGAFREGMRKAGPRMLEPIMKVEVITPEEHLGDVIGDLNSRRGQINSFSDKPGGLKVVDALVPLAEMFQYVSTLRGMTKGRASYTMQLSKFDVVPQHIQNQLTSKEQEVAA 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00286 783 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 94 369 IPR000795 GO:0003924|GO:0005525
Bva08g00286 783 Pfam Elongation factor G C-terminus 687 773 IPR000640 -
Bva08g00286 783 Gene3D Translation factors 379 493 - -
Bva08g00286 783 CDD EFG_mtEFG_II 396 478 - -
Bva08g00286 783 TIGRFAM small_GTP: small GTP-binding protein domain 96 266 IPR005225 GO:0005525
Bva08g00286 783 CDD EF-G 98 368 - -
Bva08g00286 783 Pfam Elongation factor Tu domain 2 410 477 IPR004161 GO:0005525
Bva08g00286 783 Gene3D - 690 761 - -
Bva08g00286 783 PANTHER RIBOSOME-RELEASING FACTOR 2, MITOCHONDRIAL 72 776 - -
Bva08g00286 783 PANTHER TRANSLATION ELONGATION FACTOR G-RELATED 72 776 - -
Bva08g00286 783 SUPERFAMILY EF-G C-terminal domain-like 490 567 IPR035647 -
Bva08g00286 783 Pfam Elongation factor G, domain IV 565 683 IPR005517 GO:0005525
Bva08g00286 783 Gene3D Elongation Factor G (Translational Gtpase), domain 3 494 570 - -
Bva08g00286 783 TIGRFAM EF-G: translation elongation factor G 89 779 IPR004540 GO:0003746|GO:0005525|GO:0006414
Bva08g00286 783 CDD EFG_mtEFG1_IV 569 684 IPR005517 GO:0005525
Bva08g00286 783 SUPERFAMILY Ribosomal protein S5 domain 2-like 565 685 IPR020568 -
Bva08g00286 783 CDD EFG_III 491 566 IPR009022 -
Bva08g00286 783 Hamap Elongation factor G [fusA]. 92 778 IPR004540 GO:0003746|GO:0005525|GO:0006414
Bva08g00286 783 Gene3D - 571 774 IPR014721 -
Bva08g00286 783 Pfam Elongation factor Tu GTP binding domain 95 367 IPR000795 GO:0003924|GO:0005525
Bva08g00286 783 Gene3D - 87 378 IPR027417 -
Bva08g00286 783 SMART EFG_C_a 686 774 IPR000640 -
Bva08g00286 783 SMART EFG_IV_2 566 684 IPR005517 GO:0005525
Bva08g00286 783 SUPERFAMILY Translation proteins 350 490 IPR009000 -
Bva08g00286 783 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 367 IPR027417 -
Bva08g00286 783 Pfam Elongation Factor G, domain III 490 563 IPR041095 -
Bva08g00286 783 PRINTS GTP-binding elongation factor signature 144 152 IPR000795 GO:0003924|GO:0005525
Bva08g00286 783 PRINTS GTP-binding elongation factor signature 216 225 IPR000795 GO:0003924|GO:0005525
Bva08g00286 783 PRINTS GTP-binding elongation factor signature 180 191 IPR000795 GO:0003924|GO:0005525
Bva08g00286 783 PRINTS GTP-binding elongation factor signature 164 174 IPR000795 GO:0003924|GO:0005525
Bva08g00286 783 PRINTS GTP-binding elongation factor signature 98 111 IPR000795 GO:0003924|GO:0005525
Bva08g00286 783 SUPERFAMILY EF-G C-terminal domain-like 689 778 IPR035647 -
Bva08g00286 783 CDD EFG_mtEFG_C 689 767 IPR035649 -
Bva08g00286 783 Hamap Elongation factor G, chloroplastic. 86 783 IPR030848 GO:0003746|GO:0006414|GO:0009507
Bva08g00286 783 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 137 152 IPR031157 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00286 Bva-Chr8 1376478 1380818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00286 84 754 Eukaryotic Initiation Factors Gene Family AT1G56070 25.061 4.10e-41 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00286 K02355 - mnt:21401957 1379.39