Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00285 ATGGCAAGACTTGGGCTTTACTTGTTTATCCTGAAGCTTGTGATTTTAACGGCAGAAGCCGGTACTGGCATGCGCTCGAACCCAATAGAGTTCATCAAATCGTCATGCAGAGCCACTCGGTACCCTGTTTTATGCGCCGAGTCTCTGTCAGGTTACGCAAGAGTGATCGGGCGAAGCGATCGACAACTAGCTATAACAGCCTTGTCAGTGAGCATATCCAGGACTCGATCTTGTGCAGCGTTTGTGAAAAAAATGGCCAAAGTAAGGGGGATTAAATCTAGGGAGTACAACGCTGTGCAAGATTGCATAGAGAACATGGGTGATAGTGTGGACCGTCTCAGTGAATCGGTGAAGGAGCTAGGCCGTACGGGTCGTGCAGTTGGCGAGGACTTTGTGTGGCACATGAGCAACGTGCAGACTTGGGTTAGTGCTGCTCTCACCGACCAGACCACTTGTCTTGATGGTTTTGCTACTCCTCGAATGGATGGTTATGTCAAGGCTTCTATTAGGCGCAGGGTCCTCGGTGTTTCTCAGCTCACCAGTAATGCGCTTGCCTTGGTTAACCGCTTTGCGTCCAGGCACTG 584 0.5051 MARLGLYLFILKLVILTAEAGTGMRSNPIEFIKSSCRATRYPVLCAESLSGYARVIGRSDRQLAITALSVSISRTRSCAAFVKKMAKVRGIKSREYNAVQDCIENMGDSVDRLSESVKELGRTGRAVGEDFVWHMSNVQTWVSAALTDQTTCLDGFATPRMDGYVKASIRRRVLGVSQLTSNALALVNRFASRH 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00285 194 CDD PMEI-like_3 34 192 - -
Bva08g00285 194 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 190 IPR035513 -
Bva08g00285 194 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 194 - -
Bva08g00285 194 PANTHER PECTINESTERASE INHIBITOR 9 9 194 - -
Bva08g00285 194 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 190 IPR035513 -
Bva08g00285 194 Pfam Plant invertase/pectin methylesterase inhibitor 31 186 IPR006501 GO:0004857
Bva08g00285 194 SMART PMEI_2 27 186 IPR006501 GO:0004857
Bva08g00285 194 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 188 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00285 Bva-Chr8 1373529 1374460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00285 32 187 Carbohydrate Esterase AT3G14310 32.075 3.79e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00285 - - mtr:MTR_5g012000 264.233