Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00282 ATGGGGAGGCAACCATGCTGTGACAAGCTTGGGGTGAAGAAAGGCCCGTGGACCGCTGAGGAAGACAAGAAGCTCATCAACTTCATTCTCACTAATGGCCAGTGCTGTTGGCGAGCTGTACCCAAGCTTGCTGGCCTCCGCCGCTGTGGCAAGAGTTGCCGCCTTCGTTGGACTAATTATCTTCGCCCCGACTTGAAGAGAGGACTTCTCACAGAAGCAGAAGAGCAACTCGTTATTGATCTTCATGCCCGTCTTGGCAAcagGTGGTCCAAGATTGCTGCTAGATTACCAGGAAGGACAGACAATGAGATTAAAAATCATTGGAACACTCACATCAAGAAGAAGCTAATAAAGATGGGTATAGATCCTGTTACTCATGAACCCCTTAGTAAACAAGAAACGTCATCCTCTGCTGAGAATATGCCGCaatctgaaaataaaaatcaagttaAGGAAACAGACGGGGTTGTCAACTCGGAGGAGAATTCAAGCTCATCCCCAGCAGAAAATTCTTCTGGGGACGAATCCCTTTTGCTAGATAGCATTTGCAGTGATGACTCCCTAATGAACAGCTTATGGCTGGATGAAACTCCACTGGTTGAAGCATTATGGGACAGCACACCTAAAGTAgagaataataacaataataacgACAACATGGGTGGCTTGCCATATTGGGAGGATAATTGTGCTTGGTTATTGGACTGTCAAGACTTTGGCATTCatgattttggttttaattgTTTCAACGATATTGAGTCAAATGGACTGCAAACTCTAGGAATGGAGGGAAAGGGACAATA 803 0.4296 MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMGIDPVTHEPLSKQETSSSAENMPQSENKNQVKETDGVVNSEENSSSSPAENSSGDESLLLDSICSDDSLMNSLWLDETPLVEALWDSTPKVENNNNNNDNMGGLPYWEDNCAWLLDCQDFGIHDFGFNCFNDIESNGLQTLGMEGKGQ 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00282 267 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 252 - -
Bva08g00282 267 Gene3D - 12 67 - -
Bva08g00282 267 PANTHER PROTEIN ODORANT1 2 252 - -
Bva08g00282 267 MobiDBLite consensus disorder prediction 128 176 - -
Bva08g00282 267 CDD SANT 16 61 IPR001005 -
Bva08g00282 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva08g00282 267 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva08g00282 267 Gene3D - 71 156 - -
Bva08g00282 267 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva08g00282 267 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Bva08g00282 267 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva08g00282 267 CDD SANT 71 112 IPR001005 -
Bva08g00282 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva08g00282 267 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bva08g00282 267 MobiDBLite consensus disorder prediction 127 176 - -
Bva08g00282 267 SMART sant 13 63 IPR001005 -
Bva08g00282 267 SMART sant 66 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00282 Bva-Chr8 1358914 1360749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00282 1 259 MYB Transcription Factor Family AT4G12350 58.392 4.84e-103 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva08g00282 Myb_DNA-binding 2.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00282 K09422 - gmx:100786965 449.899