Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00274 ATGGAATTCGttggtttattgttttctcTGTTTCTGCTTATTGCGTTTCCCACTCTGCAACGCGTTTGCGGAAATACTGAGCTTAGAGCTCTGATGAACTTAAAGTCCTCTCTGGACCCAGAGGGCAAGGTGTTGAGCTCGTGGACCAGTGACGGTGATCCATGTAGTGGTTCCTTCGAAGGAATAGCGTGCAACGAGCACAGGAAAGTGGACAATATTACCTTACAGGGGAAGGGCCTTTCCGGTTGGGTGTCTCCGGCGGTGGCTGAACTCAAATGCTTATCGGGTCTATATCTACATTACAACAATCTCTCTGGAGAGATACCCAGAGAGATTTCAAATCTCGCTGAACTGGTGGATCTCTATCTTGATGTGAATTCTCTTTCTGGAAGCATTCCTTCTGAGGTCGGCCACATGGCTAGTCTCCAAGTGCTGCAGATATGTTGTAACAAACTGGTGGGAAGTATACCTGCACAGATTGGTTCGTTGAAGAAGcttaattctctctctttgcaATCTAATAAATTAGCTGGTTCAATTCCTCAAAGCTTGGGGAACTTGGAGAACCTAAGGAGGCTGGATTTGAGCTTCAACAACCTCAGTGGAACAATACCTGCAACACTAGCTGATATTCCAAATTTGGAAGTTGTACGTGTTCAAAACAACTCTCTATCCGGAATTGTTCCTTCTGCATTGAAGGACTTAAGGGAAGGATTCCAAGGTGCAAACAACACAGGTTTATGTGGAATTGGGTTTTCTACTCTAAGAGCTTGTACCGGATATGATAATGTAAATCTTAACCAGCCCGATACCTCAAATCCACCCCTATTTAGTAACCATACAAGGAATTTACCGGAGTCTGCAAAATTCAACTCGCATTGTAACCAGACCCATTgttcaaaatcaacaagatttCCTCAAACTGTAATTGCAGCAGGGGTAATAACTACCACTATCACATTAATGGGCGCTGGCTTTTTGACTTTCGTCAGATACCGCCGCCAGAAACAGAAGATTAAGATTAGAAATACATCAGATTCTTCAGAAGGCCAGCTTAGCCCTGACCAGCCTAAAGAATTCTACACGAGAAGTCCATCTCCACTTGTTAATCTTAATTATCCTAATGGATGGGATACATTACAAGATTGTCAAGATGGCCACGGATTATCCCATGAATATCTCAACACTTTTAGGTTCAACGTGGATGAGGTCGAATCTGCAACACAGTATCTTTCTGAGGCCAATTTATTAGGCAAGAGCAAGTTCTCCGCTGTCTACAAGGGAGTTCTCAGAGATGGTTCTCCTGTGGCTATTAGAAGCATTAATCAGACATACTGTAAAACCGAGGAAGCTGAATTTATTGAAGGGTTGAATTTATTAACTTCACTGAGACACGAAAACCTCGTTAGATTGAGAGGTTTCTGTTGCTCAAGGAGCAGAGGTGAATGTTTCCTAATCTATGACTTTGCCCCCAACGGTAATCTGTCTCAATGTCTTGACGTGGAAGATGGAAGTGACCATGTACTTGATTGGTCCAAGAGGATTTCTATCATCAAGGGCGTTGCAAAAGGTATCGGATATCTTCATAGAAGTGAATCAAACAAACCTGCGATAGTTCACCAAAATCTTTCCGTTGAAAAAGTTGTCCTTGACCATCAGTTTAACCCACTGATTATGGAAGCCGGCCTTCCTAAGCTTCTTGCAGATGATGTGGTTTTCTCAGCTCTTAAAGTAAGTGCTGCAATGGGATACCTAGCCCCCGAGTATATCACTACTGGCCGTTTTACTGAGAAGATTGATATTTATGCTTTTGGGGTTATCGTTCTTCAAGTTCTATCTGGGAAGAAAACAATAGGAGGTTCAATTAGGATGGCGCTTGAGTCTTATAgatttgaagattttattgATACAAATCTCAAGGGAAGATATTCTAAATCTCAAGCAGCAGTTCTTGCAAAGCTCGCAATGCTGTGTACCCATGAACTTCCTGATCAAAGGCCAACCATGCAAGAGGTGATTTCGGACCTGCACGTGCTTCCTGCAGATTCCTG 2051 0.4169 MEFVGLLFSLFLLIAFPTLQRVCGNTELRALMNLKSSLDPEGKVLSSWTSDGDPCSGSFEGIACNEHRKVDNITLQGKGLSGWVSPAVAELKCLSGLYLHYNNLSGEIPREISNLAELVDLYLDVNSLSGSIPSEVGHMASLQVLQICCNKLVGSIPAQIGSLKKLNSLSLQSNKLAGSIPQSLGNLENLRRLDLSFNNLSGTIPATLADIPNLEVVRVQNNSLSGIVPSALKDLREGFQGANNTGLCGIGFSTLRACTGYDNVNLNQPDTSNPPLFSNHTRNLPESAKFNSHCNQTHCSKSTRFPQTVIAAGVITTTITLMGAGFLTFVRYRRQKQKIKIRNTSDSSEGQLSPDQPKEFYTRSPSPLVNLNYPNGWDTLQDCQDGHGLSHEYLNTFRFNVDEVESATQYLSEANLLGKSKFSAVYKGVLRDGSPVAIRSINQTYCKTEEAEFIEGLNLLTSLRHENLVRLRGFCCSRSRGECFLIYDFAPNGNLSQCLDVEDGSDHVLDWSKRISIIKGVAKGIGYLHRSESNKPAIVHQNLSVEKVVLDHQFNPLIMEAGLPKLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKIDIYAFGVIVLQVLSGKKTIGGSIRMALESYRFEDFIDTNLKGRYSKSQAAVLAKLAMLCTHELPDQRPTMQEVISDLHVLPADS 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00274 683 MobiDBLite consensus disorder prediction 340 360 - -
Bva08g00274 683 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 678 - -
Bva08g00274 683 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 6 678 - -
Bva08g00274 683 Pfam Leucine rich repeat 141 200 IPR001611 GO:0005515
Bva08g00274 683 Gene3D Phosphorylase Kinase; domain 1 382 489 - -
Bva08g00274 683 Gene3D Transferase(Phosphotransferase) domain 1 490 679 - -
Bva08g00274 683 SUPERFAMILY L domain-like 23 235 - -
Bva08g00274 683 Pfam Protein tyrosine and serine/threonine kinase 415 676 IPR001245 GO:0004672|GO:0006468
Bva08g00274 683 SMART LRR_typ_2 91 115 IPR003591 -
Bva08g00274 683 SMART LRR_typ_2 187 210 IPR003591 -
Bva08g00274 683 SMART LRR_typ_2 163 186 IPR003591 -
Bva08g00274 683 SMART LRR_typ_2 211 234 IPR003591 -
Bva08g00274 683 SUPERFAMILY Protein kinase-like (PK-like) 391 678 IPR011009 -
Bva08g00274 683 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Bva08g00274 683 ProSiteProfiles Protein kinase domain profile. 411 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00274 683 Gene3D Ribonuclease Inhibitor 140 260 IPR032675 -
Bva08g00274 683 Gene3D Ribonuclease Inhibitor 26 139 IPR032675 -
Bva08g00274 683 MobiDBLite consensus disorder prediction 344 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00274 Bva-Chr8 1324131 1327052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00274 6 524 Miscellaneous Gene Families AT4G22730 61.049 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Bva08g00274 PK_Tyr_Ser-Thr 3.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00274 - - gmx:100777169 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00274 08 1324131 1327052 Bva08g00274 08 1324131 1327052 ECH