Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00258 ATGGAGACAACGGACGGCGTCAGCAGTGGGGTTACGGTGGTGGGATCAGATGCTCCGTCGGACTATCATGTGGCTCCGAGGACCGAAAACCAAGCTCCGACTGGTGGATCACCAACATCAACACCGGCGCCGGCGGCGGAAGGGAGCGTGGCACCACCACAGCCGGGTCCTATAACGGCGGCGCCGGTGGCCACAACCATGCcagcaaagaaaaagaggggTCGGCCCAGAAAGTATGGACCAGACGGGTCAGTGACCATGGCGCTATCTCCCAAGCCGATATCTTCTTCAGCTCCACCGCCAATAATCGATTTCTCTTCGGAGAAGCGGGGAAAAGTACGGCCAGCTAGCTCGGTGAGCAAAACCAAGTTCGAGGTCGAGAACTTAgGTGAATGGGTTGCATGCTCTGTTGGTACGAATTTTACACCCCATATCATCACTGTTAATTCAGGGGAGGATGTCACTATGAAGGTAATATCGTTTTCTCAGCAAGGACCACGAGCTATATGCATTCTTTCTGCCAATGGTGTCATATCAAGTGTCACACTCCGTCAGCCTGATTCTTCTGGGGGCACATTGACATACGAGGGGCGATTTGAAATTCTGTCCTTATCTGGATCCTTCATGCCAAACGAAAGTGGAGGGACGCGAAGCAGATCTGGTGGAATGAGTGTTTCTTTAGCAAGTCCAGATGGGCGTGTTGTAGGTGGTGGAGTAGCTGGTCTATTAGTAGCTGCAAGTCCTGTGCAAGTAGTGGTAGGCAGTTTTCTGGCTGGAAACCAGCATGAGCAGAAgacaaagaaacagaaacacGAAATTATAATGAGTGGCACACCAACTGCGGCTATTCCTATTTCTAGTGCGGAACCAATACATAACAtgtcatcttcatcttccttcCGTGGAGATAATAATTGGTCTGCAATGCCGGCATCAGCAGATACAAGGAATCAGCCAACTGACATTAATGTGTCACTGCCTGGAGGGTG 989 0.4833 METTDGVSSGVTVVGSDAPSDYHVAPRTENQAPTGGSPTSTPAPAAEGSVAPPQPGPITAAPVATTMPAKKKRGRPRKYGPDGSVTMALSPKPISSSAPPPIIDFSSEKRGKVRPASSVSKTKFEVENLGEWVACSVGTNFTPHIITVNSGEDVTMKVISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQKTKKQKHEIIMSGTPTAAIPISSAEPIHNMSSSSSFRGDNNWSAMPASADTRNQPTDINVSLPGG 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00258 329 CDD DUF296 142 233 IPR005175 -
Bva08g00258 329 MobiDBLite consensus disorder prediction 1 15 - -
Bva08g00258 329 Gene3D - 143 275 - -
Bva08g00258 329 ProSiteProfiles PPC domain profile profile. 138 280 IPR005175 -
Bva08g00258 329 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 9 327 - -
Bva08g00258 329 MobiDBLite consensus disorder prediction 293 329 - -
Bva08g00258 329 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 327 IPR039605 GO:0003680
Bva08g00258 329 MobiDBLite consensus disorder prediction 30 44 - -
Bva08g00258 329 SUPERFAMILY AF0104/ALDC/Ptd012-like 140 260 - -
Bva08g00258 329 Pfam Plants and Prokaryotes Conserved (PCC) domain 143 256 IPR005175 -
Bva08g00258 329 MobiDBLite consensus disorder prediction 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00258 Bva-Chr8 1256317 1260236 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00258 1 326 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 64.553 4.72e-136 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00258 - - gmx:100801730 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00258 08 1256317 1260236 Bva08g00258 08 1256317 1260236 ECH