Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00252 ATGGGTTCTGAACAGAACGATGGCACAAGCTACCAGCCGTCTGAGCCGAAGCCATGCGCAAACAACTGTGGCTTCTTCGGCAGCGCAGGCACCATGAATCTTTGCTCTAAATGTTTCAGAGATTTCCACATCAAAGAGGAACAAGCAGCTTCGGCGAAAGCTGCTATGGAGAAATCTCTGAACCCCATTTCCCAGGCGCCTGCAGATAATCAGACGATGGGAGCAATCGTTTTGGCGGAGCCCTTGGCGGGAACCTCCTCATCCACCTCTACTTGTGAAGCATCTCCGTCCGCATCGACGGCTTTTGGCAGCAACCAACCCCGGCCAAAGGCGGCGAACCGGTGCTGGAGTTGTAACAAGAAGGTGGGTTTGACCGGATTCATGTGCAAGTGTGGGAGCACTTTCTGCGGGACACATCGTTATCCGGAGAAGCACGAGTGTATATACGATTTCAAGGCTGCTGGGCGCGATGCCATTGCCAAGGCTAATCCCGTTGTCAAAGCCGACAAGGTGGATAGGTTTTA 524 0.5324 MGSEQNDGTSYQPSEPKPCANNCGFFGSAGTMNLCSKCFRDFHIKEEQAASAKAAMEKSLNPISQAPADNQTMGAIVLAEPLAGTSSSTSTCEASPSASTAFGSNQPRPKAANRCWSCNKKVGLTGFMCKCGSTFCGTHRYPEKHECIYDFKAAGRDAIAKANPVVKADKVDRF 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00252 174 SMART AN1_Zf_4 115 152 IPR000058 GO:0008270
Bva08g00252 174 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 19 64 - -
Bva08g00252 174 Gene3D - 85 170 IPR035896 -
Bva08g00252 174 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 1 1 174 - -
Bva08g00252 174 Pfam AN1-like Zinc finger 115 150 IPR000058 GO:0008270
Bva08g00252 174 Pfam A20-like zinc finger 18 40 IPR002653 GO:0003677|GO:0008270
Bva08g00252 174 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 174 - -
Bva08g00252 174 SMART A20_3 16 40 IPR002653 GO:0003677|GO:0008270
Bva08g00252 174 ProSiteProfiles Zinc finger AN1-type profile. 109 155 IPR000058 GO:0008270
Bva08g00252 174 SUPERFAMILY AN1-like Zinc finger 104 169 IPR035896 -
Bva08g00252 174 Gene3D - 1 63 - -
Bva08g00252 174 ProSiteProfiles Zinc finger A20-type profile. 13 47 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00252 Bva-Chr8 1213480 1215083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00252 13 174 C2H2 Transcription Factor Family AT3G52800 43.902 6.33e-37 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00252 - - zju:107403429 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00252 08 1213480 1215083 Bva08g00252 08 1213480 1215083 ECH