Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00249 ATGAGAAGACTCCGTcaattctttctctctcatgcTCTGCTCTGCTCTatcctttgttttatttcattcgTCACAGTCTCACCTGCCATTGAAAAGGAGATTTTGCTGCAATTTAAAGGTAGCATTACAGATGATCCATACAACAGTTTGGGTTCATGGGCTTTAAGTGGAAACCCTTGTGCAGACTACGAGGGTGTTTTCTGTAACTCGGAAGGATTTGTGGAAAGGATTGTTCTTTGGAACACTAGCTTGGCCGGAGTATTATCTCCGGCTCTGTCGGGGTTGAAATCGTTGAGGATTTTGACATTGTTCGGGAATCGCTTTTCGGGTCATATCCCTCGAGAATATGCTGACATACTCACATTGTGGAAGATAAATTTGAGTACCAATGCATTATCTGGTTCAATTCCAGACTTCATTGGCGATTTGCCGAGCATCCGCTTTCTAGATTTGTCTAGGAATGGCTTCACCGGGGAGATACCATCAGCTTTGTTTAGGTACTGTTACAAAACCAAGTACATTGCTATCTCTCATAACAGGCTTTCAGGTTCAATTCCAGCGTCGTTGGTGAATTGCTCCAACCTTGaaggttttgatttttctttcaacaatcTTAGTGGGGGTATTCCATCTCGAATTTGTGACATTCCCAGCTTATCCTGTATAATCTTGAGAAGCAATGGCTTATCAGGCAGTGTGCAAGAGCAGATTCCGGCATGCCAAAGTTTAAAACATCTCGACCTTGGTAATAATTTGTTCACTGGCTCGGCCCCATTCAACACCCTTGAAATGcaaaatattacttatttcAATGTATCTTATAACGGGTTTAGTGGACAGATTCCCGAGACGACAACTTGTAGTGAGACATTACAAGTTTTTGATGCTTCAGGGAATGATTTGGATGGGGAGATTCCCCTGAGCTTAACAAAATGCAAAAACTTAAAGCTACTGGCTTTGGAGTTAAATCGGCTGGATGGAAGTATCCCGGAAAGGATTCAGGATTTGGAAAGGTTATTAGTTGTTAAACTGGGTAATAATTCAATAGGTGGGATGATTCCAGAGGGGTTTGGCAAAATTGAGCTACTTGAAGTTCTAGATTTGCACAATCTAAACCTTGTTGGTGAAATTCCCAGTAGTATAAGCAATTGCAGGTTTCTTCTTGAGCTGGATATTTCTGGCAATAACTTGGAGGGAGAAATTCCTCAGACACTTTACAACATGACGAATCTGAAAGTCCTTGACCTTCATCAAAACCAGCTTAATGGAAGCATCCCACCAAGCCTAGGAAACCTGTCAAAGCTCCAATCCCTGGATTTGTCCCACAATTCTCTCTCTGGCTCAATCCTTTCTTCGCTTGGAGATTTGAAAAACTTGGCACATTTTAATCTGTCATTTAACAATCTCTCAGGCCCCATTCCCCTTGTTTCAACAATCCAGGGTTTTGGgtcatcttcattttcaaacaaTCCGTTTCTTTGTGGCGCTCCTTTGGACACACCTTGCTCAGCAAATGGCACAACACCTCCTACAGTTTCTGGTAAAACGAAGGTTCTAAGTGTCTCTGCAATTGTTGCAATTGTTGCTGCAGCTGTAATTTTTACTGGGTTTTGTTTGGTGACCATCATGAATGTTAAGGCTCGTAGTAGGAAAAAAGATGATCGGGCAATGATTATTGAGAGCACACCTCTTGGGTCAACGGAATCAAATGTTATAATTGGAAAGTTGGTTCTTTTCAGCAAAAGTTTACCGTCAAAGTATGAAGATTGGGAGGCAGGTACCAAAGCGTTGCTCGACAAAGAGTCTCTGATAGGCAGTGGATCAATTGGTACAGTCTACAGAACTAATTTTGAAGGTGAGATCTCAATTGCAGTGAAAAAACTCGAGACTTTGGGAAGGATCAGAAACCAGGATGAATTTGAACACGAAATTGGGCGACTAGGCAACCTTCAACACCCTAAATTAGTTGCCTTTCAAGGTTATTATTGGTCATCGACTATGCAGTTGATTCTATCTGAGTTTGTCCCAAATGGGAATTTATATGATAATCTACATGGGATAGGTTATCCAGGAACTAGCACTTGTAGTGGCAACAAGGAGTTATATTGGTCTAGAAGGTTCCAAATTGCAGTTGGAACCGCAAGAGCACTTGCTTATCTTCACCATGATTGTCGACCTCCAATTCTTCATCTCAACGTTAAATCATCTAACATACTCTTAGATGAAAAGTACGAAGCTAAGTTGTCTGATTATGGATTAGGAAAGTTACTGCCCATTCTGGACAATTATGGTCTGACCAAATTCCACAACTCTGTCGGGTATGTTGCACCAGAGTTGGCTCAAAGTTTGAGACAGAGTGAGAAATGcgatatttatagttttgggGTCATTCTTTTGGAGCTGGTTACAGGGAGGAAGCCTGTAGAGAGTCCAACAACAAACGAAGTGGTGGTTTTATGTGAATATGTTAGGGAGTTATTGGAGATTGGCTCTGCTTCAGATTGCTTTGATAGAAGTTTACTGGGATTTGCGGAGAACGAATTGATTCAGGTTATGAGATTGGGACTGATTTGTACTTCAGAGGATCCTGCAAGGAGACCAAGCATGGCTGAGGTTGTCCAGGTCCTTGAGTCTATCAGAAATGGATTGGAATCACATTA 2660 0.4011 MRRLRQFFLSHALLCSILCFISFVTVSPAIEKEILLQFKGSITDDPYNSLGSWALSGNPCADYEGVFCNSEGFVERIVLWNTSLAGVLSPALSGLKSLRILTLFGNRFSGHIPREYADILTLWKINLSTNALSGSIPDFIGDLPSIRFLDLSRNGFTGEIPSALFRYCYKTKYIAISHNRLSGSIPASLVNCSNLEGFDFSFNNLSGGIPSRICDIPSLSCIILRSNGLSGSVQEQIPACQSLKHLDLGNNLFTGSAPFNTLEMQNITYFNVSYNGFSGQIPETTTCSETLQVFDASGNDLDGEIPLSLTKCKNLKLLALELNRLDGSIPERIQDLERLLVVKLGNNSIGGMIPEGFGKIELLEVLDLHNLNLVGEIPSSISNCRFLLELDISGNNLEGEIPQTLYNMTNLKVLDLHQNQLNGSIPPSLGNLSKLQSLDLSHNSLSGSILSSLGDLKNLAHFNLSFNNLSGPIPLVSTIQGFGSSSFSNNPFLCGAPLDTPCSANGTTPPTVSGKTKVLSVSAIVAIVAAAVIFTGFCLVTIMNVKARSRKKDDRAMIIESTPLGSTESNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKESLIGSGSIGTVYRTNFEGEISIAVKKLETLGRIRNQDEFEHEIGRLGNLQHPKLVAFQGYYWSSTMQLILSEFVPNGNLYDNLHGIGYPGTSTCSGNKELYWSRRFQIAVGTARALAYLHHDCRPPILHLNVKSSNILLDEKYEAKLSDYGLGKLLPILDNYGLTKFHNSVGYVAPELAQSLRQSEKCDIYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRELLEIGSASDCFDRSLLGFAENELIQVMRLGLICTSEDPARRPSMAEVVQVLESIRNGLESH 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00249 886 ProSiteProfiles Leucine-rich repeat profile. 434 457 IPR001611 GO:0005515
Bva08g00249 886 SUPERFAMILY Protein kinase-like (PK-like) 599 877 IPR011009 -
Bva08g00249 886 PANTHER - 12 885 - -
Bva08g00249 886 SMART LRR_typ_2 336 359 IPR003591 -
Bva08g00249 886 SMART LRR_typ_2 408 431 IPR003591 -
Bva08g00249 886 SMART LRR_typ_2 143 167 IPR003591 -
Bva08g00249 886 SMART LRR_typ_2 432 456 IPR003591 -
Bva08g00249 886 SMART LRR_typ_2 95 118 IPR003591 -
Bva08g00249 886 ProSiteProfiles Protein kinase domain profile. 598 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00249 886 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Bva08g00249 886 Gene3D Ribonuclease Inhibitor 216 508 IPR032675 -
Bva08g00249 886 SUPERFAMILY L domain-like 108 498 - -
Bva08g00249 886 Pfam Leucine rich repeat 389 445 IPR001611 GO:0005515
Bva08g00249 886 Gene3D Ribonuclease Inhibitor 144 215 IPR032675 -
Bva08g00249 886 Gene3D Ribonuclease Inhibitor 30 143 IPR032675 -
Bva08g00249 886 PRINTS Leucine-rich repeat signature 387 400 - -
Bva08g00249 886 PRINTS Leucine-rich repeat signature 432 445 - -
Bva08g00249 886 CDD STKc_IRAK 604 879 - -
Bva08g00249 886 Pfam Protein kinase domain 600 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00249 886 PANTHER UNNAMED PRODUCT 12 885 - -
Bva08g00249 886 Gene3D Transferase(Phosphotransferase) domain 1 679 885 - -
Bva08g00249 886 Gene3D Phosphorylase Kinase; domain 1 598 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00249 Bva-Chr8 1198151 1201674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00249 7 885 Receptor kinase-like Gene Family AT1G62950 63.892 0.0 1100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Bva08g00249 Pkinase 1.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00249 - - gmx:100800970 1390.56