Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00228 ATGACGTCGTATCAGGAGCAGGAGTTAGATCATGACGACGATGGAACAACGTCCGACATCAGCACCAGTGCCGGCGAGCCGGAACTTGACTCTGCTGTCGCCACCAGCACGCACAGCACTGGAGTCCCAAAAGAGAGTACGTTGGAGGATACCACGGCTTTCCAAGCGTTGCCGTTGAAGGAGGAGCCCATCGATTCTGACCCTCCATCGGACCCGGACCAAAAGACCCCCTCAatctcaaattcaaaatttccaattggGGTTGTTCCAGTGGCGATGCAGATGCAGATGCCCATGCCCATCACGCCAACTAAACGCTCCTCTACCAAGGACCGCCACACCAAAGTAGAAGGCCGTGGGCGCAGGATCCGAATACCCGCCACGTGCGCAGCTCGGATCTTTCAGCTGACTCGGGAGCTAGGCCATAAGTCTGACGGCGAAACGGTCCGGTGGCTTCTCGAACGCGCCGAGCAGGCCATAATCGAGGCCACCGGAACCGGCACCGTTCCGGCTATCGCTGTCTCTGTCGGGGGAACTTTGAAAATTCCCATAACGTCCAACAGTACCAATAATCAACCCGGTGCTGAACCTGCCAAGAAGAGGAAACGAGCGTCGAATAGCGAGTTCGTGGACGTAAGTGAAGCCGTTTCACTGTCCTCGGGTCTGGCTCCGGTTCAACCCGCAGCGCAAGGTCTTGTGCCTGTCTGGGCAGTGGGTAACACTAACATGATGGTTCCGGCAAGTGCTTTCTGGATGATCCCACCGGTGACGAATACCCCGGTTGGTGGAGTTAGCGGGTCGTCGAACCAGCAAGCGCAGATATGGACTTTATCTCCGACAGTGACTCCCATTTTCAACATGTCGGCGAGACCAATATCGTCTTTCGTGGCAGCAACAAATATCCCGAGCGGCGTACAAGTTTTGCACGCGGGTTGTAACAATACGATGTCTAACTCAGCGGCGAGCACAAGTATAGCGGGGCCAAAGGTGGCGAAGAAGTCGATCATGGCACCCAGCGTCTGTTCTAGCGGGACAGGCGATACTGATAGTGGTAGTGGCAGCAAGGCTCAGATGTTACGGGATTTTTCGTTGGAGATTTACGATAAGCAAGAATTGCAGTTCATGCGTCGGTCTGGGAATCAACAAGAACAAGCTTCCAATAAATG 1166 0.5377 MTSYQEQELDHDDDGTTSDISTSAGEPELDSAVATSTHSTGVPKESTLEDTTAFQALPLKEEPIDSDPPSDPDQKTPSISNSKFPIGVVPVAMQMQMPMPITPTKRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLERAEQAIIEATGTGTVPAIAVSVGGTLKIPITSNSTNNQPGAEPAKKRKRASNSEFVDVSEAVSLSSGLAPVQPAAQGLVPVWAVGNTNMMVPASAFWMIPPVTNTPVGGVSGSSNQQAQIWTLSPTVTPIFNMSARPISSFVAATNIPSGVQVLHAGCNNTMSNSAASTSIAGPKVAKKSIMAPSVCSSGTGDTDSGSGSKAQMLRDFSLEIYDKQELQFMRRSGNQQEQASNK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00228 388 MobiDBLite consensus disorder prediction 1 83 - -
Bva08g00228 388 MobiDBLite consensus disorder prediction 185 206 - -
Bva08g00228 388 PANTHER TRANSCRIPTION FACTOR TCP9-LIKE 15 385 - -
Bva08g00228 388 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 385 IPR005333 GO:0003700
Bva08g00228 388 ProSiteProfiles TCP domain profile. 109 163 IPR017887 -
Bva08g00228 388 MobiDBLite consensus disorder prediction 1 17 - -
Bva08g00228 388 MobiDBLite consensus disorder prediction 18 53 - -
Bva08g00228 388 Pfam TCP family transcription factor 108 189 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00228 Bva-Chr8 1105589 1107147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00228 103 375 TCP Transcription Factor Family AT2G45680 48.136 1.05e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva08g00228 TCP 4.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00228 - - zju:107405250 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00228 08 1105589 1107147 Bva08g00228 08 1105589 1107147 ECH