Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00212 ATGTTGGCTGGGTGTTCTAGTTCTACATTGTTGTCACCAAGGCATAGATTGAGGAGTGAAGCATCTGCACAGTTTCAAGCCTGCCATTTTCAGCTGCCTTCAATGAGCACACACAGACTGGACTTGCCATGTAGCTTCCCGCGGAAAGACACGTCGCGTTCGCAGCCCTCAAGACCGGTGGGCGTTTCAGTGGAGAAGCAGATAGAAGCAAAAACCAACACTTGTTCTCTTAAGCACAACATTCGACTACCGCCATTGGCAACAAGTACTCAGGCTACCACTGCACAGACAGCATTTGTTGAGATCAAGGATGAATTTTGGGAGAAGGGTAAGAGTTTGAAGAGACTTGCAGACCAGGGATCCGTGGATGAGGCCTTCATCAACAGGGccaagaggaagaagagtaGTGATAATGGGAAATCTGATGATATTCTTGAAGGAGGGGATAGTTTGAGTTTAGGCCAAATGAGTGGCAACTTTTGTTGGTTTCAGCCTGGTTTTCAGATGCCTAGGTCTGTTCAGAGTTTAGCAGCAGGCCTCAACCCTTcacttcctttctctctcaccTGTCCAGGGGAAGAAGATAGGCTCTGTATTGTGCCTTCTGAAGTGGTCTCTGCACCTTCGCCTTTATCAAATCATCCGTGGGTGCAGTCTGTTGTAACTGGGATCACCGACCTAGTTGAGAAGGACGGTGAGAGTAGCCAGCAACCTGAAAAGGCAGCCTCAGTTTCCAATACTTCATCAGAAAGCCAAAGCCAAAGCCAGAGTCAGAGCCCGAGGTTAAACGAGAATGCCTCAGAGCACGAAGTGGGTAATGGCAATGGGTCAGGGAATCCTCATCCCCTCGAAGGCACTGAGGTGGAGACAGGGGAGGTGGATAACCAAGAAGAGCATCGAGGGTTTGAGCTTGTCAGCCTGCTTACAGCTTGTGTTGACGCTATTGGGTCGAAGAATGTAGCTGCAATCAATCATTTCATTGCCAGACTGGGTGATCTTGCGTCTCCAAGGGGAACCACTATAAGCCGTCTTTGTGCTTATTTTACTGAAGCCTTGGCTGTCCGTGTTACAAGGCTTTGGCCTCACATTTTCCATATTACCACACCTCGGGAGCTAGACAGGGTGGACGACGACACTACTTCTGCATTAAACCAGGTCAGCCCAATCCCCAAGTTTCTACATTTCACATCAAACGAAATACTGTTGAGGGTTTTTGAAGGGAAAGAAAGGGTTCACATCATAGATTTCGACATCAAACAAGGGTTTCAATGGCCTAGCTTGTTTCAGAGCTTGGCTTCTAGGACTAATCCTCCAAGCCATGTTAGAATCACGGGTATTGGTGAGTCCAAGCAAGAACTGAATGAAACAGGAGACAGACTTGCTGGATTTGCTGAAGCACTGAACCTTCCCTTCGAGTTTCACCCAGTTGTGGACAGGTTGGAGGATGTGAGGCTTTGGATGCTTCATGTGAAGGAACATGAAAGCGTAGCTGTGAATTGTGTTTTCCAGCTCCACAAGACGCTTTATGATGGGAATGGAGGAGCACTGAGGGATTTCTTGGGACTCATTCGCAGCACAAATCCAACCATTGTCCTCGTAGCAGAGCAAGAGGCAGAGCATAACAACCCCAGGTTGGAAAATAGAGTCTGCAATTCCTTGAAGTATTACTCTGCTCTATTTGATTCGATTGACCACTGCGGCCTTCCACTGGGAAGTCCTCTCAGAATTAAAATAGAGGAGATGTATGCTCGGGAGATCAGGAATATCATTGCTTGCGAAGGAAGCGACAGGTTGGAGCGGCACCAGAGTTTTCAGAATTGGCGGAGGATGATGGAGCAAGGAGGGTTTCGATGCATGGGAATTACTGAGAGGGAAATGATTCAGAGCCAATTTTTGTTGAAGATGTATTCTTGTGATTATTACAATGTGAAGAAGCAGGAGCAGCAACAAGAAGGAGCAGCAGCACTTACCCTGGGCTGGCTTGATCAGCCTCTGTACACAGTCTCAGCATGGGCACCAGTGGATGCAGCAGGGAGTTCATCCTCTTTTTCTCACCCTAGTTG 2063 0.4702 MLAGCSSSTLLSPRHRLRSEASAQFQACHFQLPSMSTHRLDLPCSFPRKDTSRSQPSRPVGVSVEKQIEAKTNTCSLKHNIRLPPLATSTQATTAQTAFVEIKDEFWEKGKSLKRLADQGSVDEAFINRAKRKKSSDNGKSDDILEGGDSLSLGQMSGNFCWFQPGFQMPRSVQSLAAGLNPSLPFSLTCPGEEDRLCIVPSEVVSAPSPLSNHPWVQSVVTGITDLVEKDGESSQQPEKAASVSNTSSESQSQSQSQSPRLNENASEHEVGNGNGSGNPHPLEGTEVETGEVDNQEEHRGFELVSLLTACVDAIGSKNVAAINHFIARLGDLASPRGTTISRLCAYFTEALAVRVTRLWPHIFHITTPRELDRVDDDTTSALNQVSPIPKFLHFTSNEILLRVFEGKERVHIIDFDIKQGFQWPSLFQSLASRTNPPSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEHESVAVNCVFQLHKTLYDGNGGALRDFLGLIRSTNPTIVLVAEQEAEHNNPRLENRVCNSLKYYSALFDSIDHCGLPLGSPLRIKIEEMYAREIRNIIACEGSDRLERHQSFQNWRRMMEQGGFRCMGITEREMIQSQFLLKMYSCDYYNVKKQEQQQEGAAALTLGWLDQPLYTVSAWAPVDAAGSSSSFSHPS 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00212 687 MobiDBLite consensus disorder prediction 237 274 - -
Bva08g00212 687 Pfam GRAS domain family 304 671 IPR005202 -
Bva08g00212 687 ProSiteProfiles GRAS family profile. 295 672 IPR005202 -
Bva08g00212 687 PANTHER SCARECROW-LIKE PROTEIN 28 6 676 IPR030027 -
Bva08g00212 687 MobiDBLite consensus disorder prediction 130 144 - -
Bva08g00212 687 MobiDBLite consensus disorder prediction 230 294 - -
Bva08g00212 687 MobiDBLite consensus disorder prediction 130 149 - -
Bva08g00212 687 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 676 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00212 Bva-Chr8 1027487 1030762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00212 1 671 GRAS Transcription Factor Family AT1G63100 55.446 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva08g00212 GRAS 1.6e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00212 - - qsu:111999471 967.607