Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00206 ATGGGCGGTGAGAAGACTGAAAATATTTACCGACTACTGGTGGATCGGTGTCAAAGCCTGGAGGAACAACAAGCCAAGCTGAGGGAGCAGGTCGATGAACTAGTCCAGGAAAAGATGGCCATGGATCATGAGATGGTCAACTCCGATTCGAGTATGGGTTTCCTTTCggcttttttctcttctggtAGTCCCTATAAAAGCGTCTTGCAATGCATGGGTCACGCTGTTCATGTATATAGAGCTTCCTCTGGAGAGATCATATACTGGAATCGTTCAGCCGAAACTCTGTACGGATGGAAGGACTATGAAGCCATTGGGAAAAGAGTTGCTGAGCTTCTAATCGCTGAAGAGTACTATGCACCTTTGAAGGGAATTCTGGAAAGGTTAGCTAATGTTGGAACTTGGTCAGGGCAGTTTCCTTTCAAGAAGAGGTCTGGTGAAGTATTTATGGCAGTGGTGACAAAAAGTATGTTGTATGAGGATGGTGAGCTTGCTGGTGTCATCACTGTTTCAAGTGATGCGGCTGTATTTGACATTGGTAGCTCTGAAAATCTGAGAACTAACCAATCTGGTGCCAACGGCCAACCTGGACTACAGAGATTAAACTTTAACAAAGTTCAATGGCATCCACTGCCACCAATAATACCCATGCCACAGATTGCGTCATCCGTTTCCAATCTGGCATCAAAATTTCTCCTACGGCGACATGTGGATGACACAGACAATGCATGTGGTTTTTCCAGGGATAATTCAATGGATACAGGAGATGATAAATTAGAGAAGCATAATATATCTGCTGCAAGAGTCCTTTCTAAGATACCGATTAGGGGAAGTAGAAAATTTTGGAAGGATAATGGAAATGATAAGAATAATAGTACAACTGATAATACAGCGAGTAACGCAGCGAAGGATGATAATGAATTAGTTGAAAGCTCAAAGGCATTAACCACAGACCGGAATGTTGCCGAGAAAGAGAACAAAGGGAAAAAGCTCCACCAAAGGAGAGCAGATAAAACAGTTTGTGGCCACAGAACGTCTAGGGTTTCCAAAGATAGTTCTGACGTGACCTCCTCGAGAGATTGCAACGAATGTTTTCATTCACCCGTTCCTGAAGAACAATTATTAAGAATAGGCTTCCAATGTGAATTAAAGAGATTGGAGCCGGAAGCAACAAGCTTGGGAACAGAACGAGAGGTGCAAAAGCACCAAGAAGGGTTGCAATTCCCAAGCTCCAAGGAGAGTATCAGCAGCCACGAAAGTTCATCAAGCAAAGGGAAAAATGAGTCAAACTCAGTTGTAGAGTGTGAAATCCTCTGGGAAGACCTTCATTTAGGGGAGGAGATCGGACAAGGGTCTTTCGCTGTTGTTTATCATGGCATTTGGAATGGAtcggATGTTGCCGTCAAAGTTTATTTTGGCAATGGATACACCGAGGAGACCTTGCAAGACTACAGAAAAGAGATTGATATAATGAAGAGATTGAGGCATCCCAATGTATTGCTGTTCATGGGAGCAGTATATTCACAGGAAAGGCTCGCCATTGTGACAGAGTTTCTACCTAGGGGAAGTCTTTTCAGAATTCTTCACAAGAACAATCAGATATTAGACATCAGAAGGCGTCTGCGGATGGCCCTTGATGTTGCTAGAGGTATGAATTATTTACATCACAGAAATCCACCAATAGTGCACAGGGACCTGAAGTCTTCTGACCTTCTTGTTGATAAAAACTGGACTGTTAAGGTTGGAGATTTTGGCCTGTCGAGGTTGAAAGATGCAACTTTCTTGACTACAAAATCTGGAAGAGGCACCCCTTCGTGGATGGCCCCTGAAGTCCTCCGAAATGAGCCTTCAAATGAGAAatCTGATGTGTTCAGTTTTGGTGTTATCCTCTGGGAACTAATGACCCAGTCTATTCCgtggaaaattttgaattccttACAgGTTGTTGGAGTCGTAGGCTTTATGGATAGAAGACCTGACCTGCCGGAGGGGCTTGATCCCCATGTAGCATCTGTTATCCATGACTGCTGGAGAAGTGATCCAGAACAGCGTCCATCATTTGAAGAGCTTATACAGAGAATGATGTTTCTTGTCAACAGAGTAACAGCGGTGACAATTAGGAGTATTTCAGAATccta 2138 0.4261 MRLHLLYQFAASLGSGNRSAETLYGWKDYEAIGKRVAELLIAEEYYAPLKGILERLANVGTWSGQFPFKKRSGEVFMAVVTKSMLYEDGELAGVITVSSDAAVFDIGSSENLRTNQSGANGQPGLQRLNFNKVQWHPLPPIIPMPQIASSVSNLAARVLSKIPIRGSRKFWKDNGNDKNNSTTDNTASNAAKDDNELVESSKALTTDRNVAEKENKGKKLHQRRADKTVCGHRTSRVSKDSSDVTSSRDCNECFHSPVPEEQLLRIGFQCELKRLEPEATSLGTEREVQKHQEGLQFPSSKESISSHESSSSKGKNESNSVVECEILWEDLHLGEEIGQGSFAVVYHGIWNGSDVAVKVYFGNGYTEETLQDYRKEIDIMKRLRHPNVLLFMGAVYSQERLAIVTEFLPRGSLFRILHKNNQILDIRRRLRMALDVARGMNYLHHRNPPIVHRDLKSSDLLVDKNWTVKVGDFGLSRLKDATFLTTKSGRGTPSWMAPEVLRNEPSNEKSDVFSFGVILWELMTQSIPWKILNSLQVVGVVGFMDRRPDLPEGLDPHVASVIHDCWRSDPEQRPSFEELIQRMMFLVNRVTAVTIRSISES 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00206 601 SUPERFAMILY Protein kinase-like (PK-like) 307 586 IPR011009 -
Bva08g00206 601 ProSiteProfiles Protein kinase domain profile. 331 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00206 601 CDD STKc_MAP3K-like 337 583 - -
Bva08g00206 601 MobiDBLite consensus disorder prediction 169 249 - -
Bva08g00206 601 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 53-RELATED 17 160 - -
Bva08g00206 601 SUPERFAMILY PYP-like sensor domain (PAS domain) 17 97 IPR035965 -
Bva08g00206 601 PANTHER SERINE-THREONINE PROTEIN KINASE 17 160 - -
Bva08g00206 601 PANTHER SERINE-THREONINE PROTEIN KINASE 152 595 - -
Bva08g00206 601 Pfam Protein tyrosine and serine/threonine kinase 331 582 IPR001245 GO:0004672|GO:0006468
Bva08g00206 601 MobiDBLite consensus disorder prediction 281 317 - -
Bva08g00206 601 Gene3D Phosphorylase Kinase; domain 1 324 408 - -
Bva08g00206 601 MobiDBLite consensus disorder prediction 176 194 - -
Bva08g00206 601 MobiDBLite consensus disorder prediction 293 317 - -
Bva08g00206 601 PRINTS Tyrosine kinase catalytic domain signature 554 576 IPR001245 GO:0004672|GO:0006468
Bva08g00206 601 PRINTS Tyrosine kinase catalytic domain signature 444 462 IPR001245 GO:0004672|GO:0006468
Bva08g00206 601 PRINTS Tyrosine kinase catalytic domain signature 491 501 IPR001245 GO:0004672|GO:0006468
Bva08g00206 601 PRINTS Tyrosine kinase catalytic domain signature 510 532 IPR001245 GO:0004672|GO:0006468
Bva08g00206 601 PRINTS Tyrosine kinase catalytic domain signature 405 418 IPR001245 GO:0004672|GO:0006468
Bva08g00206 601 Gene3D PAS domain 15 103 - -
Bva08g00206 601 ProSitePatterns Protein kinases ATP-binding region signature. 337 358 IPR017441 GO:0005524
Bva08g00206 601 MobiDBLite consensus disorder prediction 227 246 - -
Bva08g00206 601 MobiDBLite consensus disorder prediction 195 221 - -
Bva08g00206 601 Gene3D Transferase(Phosphotransferase) domain 1 410 594 - -
Bva08g00206 601 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 53-RELATED 152 595 - -
Bva08g00206 601 TIGRFAM sensory_box: PAS domain S-box protein 16 100 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00206 Bva-Chr8 996010 1002946 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00206 324 589 MAP Kinase Kinase Kinase AT4G23050 74.060 4.25e-145 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Bva08g00206 PK_Tyr_Ser-Thr 7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00206 - - qlo:115970314 714.531