Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00203 ATGGTTCTCAAAACTGAACTTTGTCGCTTCAGCGGTGCCAAGATATACCCTAGCAAAGGTATCCGATTCATTCGCTCAGATTCCCAGGTTTTCCTCTTTGCAAATTCAAAATGCAAGAGGTATTTTCATAATCGTCTGAAGCCATCAAAGCTCAGCTGGACAGCGATGTATCGGAAGCAACATAAGAAGGACCTTGCTGCTGAAGCTGTGAAGAAGAAGCGTCGAACCACAAAGAAACCTTATTCAAGGTCGATTGTTGGTGCCACTTTGGAAGTAATACAGAAGAGACGAACTGAAAAGCCAGAAGTCCGAGATGCTGCGCGTGAGGCTGCTCTTCGtgaaatcaaagagagaaTCAAGAAAACCAAGGATGAAAAGAAGGCAAAGAAAGCAGAACTAGCAGCCAAGACACACAAGATACAGACCAAGGGAGTTCCCAAAGGTGCTGGACCTAAGGGTCCCAAACTTGGAGGTGGTGGTGGAAAGCGAtg 491 0.446 MVLKTELCRFSGAKIYPSKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLSWTAMYRKQHKKDLAAEAVKKKRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAELAAKTHKIQTKGVPKGAGPKGPKLGGGGGKR 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00203 163 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Bva08g00203 163 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Bva08g00203 163 PANTHER LOW QUALITY PROTEIN: 60S RIBOSOMAL PROTEIN L24-LIKE 1 163 - -
Bva08g00203 163 Gene3D - 69 138 - -
Bva08g00203 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Bva08g00203 163 SMART 4TRASH 8 46 IPR011017 -
Bva08g00203 163 Coils Coil 112 139 - -
Bva08g00203 163 MobiDBLite consensus disorder prediction 121 163 - -
Bva08g00203 163 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Bva08g00203 163 MobiDBLite consensus disorder prediction 121 137 - -
Bva08g00203 163 PANTHER 60S RIBOSOMAL PROTEIN L24 1 163 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00203 Bva-Chr8 986961 989441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00203 1 156 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 82.803 4.97e-83 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00203 K02896 - rcu:8265430 232.646