Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00184 ATGAGGCAAGCAGGAGCATATTCAGGGTTATTATGTGGCGGCATATCTGGAAAAATGGGACCTCAGGCTCTGCCATTGGCAaggattaagaaaataatgaagaagTCTGGATCAGGTGAGGACGTGAAAATGATTTCGGGGGAGGCTCCAATTATTTTCGCCAAAGCATGTGAGCTCTTCATTCAGGAAATAACCAAAAGGTCGTGGAACATCACCCTCAAAGGCAAAAGGAGAACTCTGCACAAAGAGGACGTCGCCTCTGCCGTTATAGCCACTGATATCTTCGACTTTTTGATATCTTTGGTTTCCAACTCTGTCACTGCTGTTCCCTCCGCCGCCGCCACTATCATGGAAATCCAAACTGATGAATCTTG 374 0.4439 MRQAGAYSGLLCGGISGKMGPQALPLARIKKIMKKSGSGEDVKMISGEAPIIFAKACELFIQEITKRSWNITLKGKRRTLHKEDVASAVIATDIFDFLISLVSNSVTAVPSAAATIMEIQTDES 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00184 124 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 107 - -
Bva08g00184 124 Gene3D Histone, subunit A 15 104 IPR009072 GO:0046982
Bva08g00184 124 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 24 89 IPR003958 -
Bva08g00184 124 SUPERFAMILY Histone-fold 18 98 IPR009072 GO:0046982
Bva08g00184 124 PANTHER HAP5 SUBUNIT OF HAP COMPLEX 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00184 Bva-Chr8 913184 913558 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00184 22 102 CCAAT-HAP5 Transcription Factor Family AT1G54830 64.198 5.09e-33 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bva08g00184 CBFD_NFYB_HMF 2.6e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00184 - - ccaj:109817175 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00184 08 913184 913558 Bva08g00184 08 913184 913558 ECH