Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00181 ATGAGGTTATATACTTCATTGTTATCGTTCTTTCTGATTTCCACGGTCTCTTTTGACACTTGTGCTTCCGTGCTATCAAATGAAGTTCGGGCGCTTACGACCTTCAAAGAAGCCGTATTCGAAGACCCAAACCAAGTTTTGTCCAGTTGGAACACGCTAGATTCAGATCCTTGTGACTGGTTTGGCGTTTCGTGCAATGCTGCTCGCGATCATGTTGTCAATCTAAACATTTCATGGTCATCTTTGAAGGGATTTCTTGCACCAGAATTGGGACAAATCACCTACTTGGAACAACTGACTTTGCATGGTAACAATCTGATTGGAATAATACCAAAAGAATTGGGCATGTTGAAATCGCTCAAGGTTTTGGATTTGGGGATGAATCAGTTATCAGGACCAATTCCTCCAGAGATTGGGAATATGGCCCTCCTTGTGAAAATAAACCTGCAGTCCAATTTATTGACTGGTAGGCTACCCTCAGAACTTGGAAACTTGAAATACCTTCAAGAACTTCGCCTGGATAGGAATAAACTTCAAGGACCTGTTCCTGGTGGTGGCAGTTCAAATGTTGCTTCAAATATGCATGAAATGTATGCGTCAAATTCGAATTTAACTGGCCTTTGTCGTTCATCTCAGTTAAAATTTGCAGATTTTTCACATAACTTCTTTGTTGGTAGCATACCCAAATGCTTGGAATATCTTCCAAGGACAAGCTTTCAAGGGAACTGCCTTCAGGGCAAAGAATTGAAGCAGCGTCCTTCCGTACAATGTGCTGGTGCTTCTCCTGCCACGAGCCATCCTGGGGTCTACCCAAAGCACCGATCTGCTGAAGATGTCTCCAAGCATCATGGGGCATCGAAACCTGCTTGGCTTTTGGCTCTAGAGATAGTGACAGGAATCATGGTcggttctttctttcttatcgGTGTCCTAACTGCTCTTCAGAAGTGTAATAACAAATCATCTATTATCATTCCATGGAAGAAATCTGCAAGCGAGAAGGAGCATATGACAGTATACATAGACCAAGACATGTTGAAGGACGTAATGAGATATAGCAGACAGGAGCTTGAAGTGGCCTGTGAAGACTTCAGCAACATCATTGGCTCCTCACCAGACAGTGTGGTCTATAAGGGAACCATAAAAGGTGGGCCTGAGATTGCTGTAATTTCCCTCTGCATTAAGGAGGAATATTGGACAGGATATCTTGAGCTCTATTTTCAGAGAGagGTGGCAGATTTAGCGAGGTTAAATCACGAGAATACAGGAAAACTACTAGGCTATTGTAAAGAGAGCGCTCCATTTACAAGGATGCTTGTTTTTGAGTATGCTTCAAATGGGACACTTTATGAACATCTACATTATGGAGAAGAATGCCAATTATCTTGGACTAGGCGCATGAAAATTGTTATTGGAATTGCACATGGACTCAAGTATCTGCATACAGAAATTGAGCCTCCATTCACTATTTCAGAGTTGAACTCTAGTGCTGTATACCTCACAGAAGATTTTCTCCCTAAGTTGGTTGATTTTGAAAGTTGGAAGACAATACTTGAAAGGTCGGAAAGGAATTCCGGTTCTGTTGGCAGCCAAGGTGCTGTTTGTGTTCTTCCAAATTCTTTCGAGGCACGCCATCTTGATATCCAAGGTAATGTGTACGCTTTTGGCGTACTTCTACTGGAGATTATCAGTGGGAGACCTCCATATTGCAAGGACAAAGGATGCTTGGTGGATTGGGCTAGAGACTACCTTGAAATGCCAGAAGTAATGTCATATGTGGTTGATCCCGAATTGAAACATTTCAAATATGAGGATCTCAAAGTAATATGTGAGGTCATAAATCTTTGTATCAATCCTGACCCCGACAAGCGTCCATCGATGCAAGAGCTATGTAGCATGCTGGAGAGCAGAATTGACACATCAATAAACGTGGAGCTCAAGGCGTCATCTTTGGCCTGGGCTGAACTAGCACTTTCATCATA 1982 0.4203 MRLYTSLLSFFLISTVSFDTCASVLSNEVRALTTFKEAVFEDPNQVLSSWNTLDSDPCDWFGVSCNAARDHVVNLNISWSSLKGFLAPELGQITYLEQLTLHGNNLIGIIPKELGMLKSLKVLDLGMNQLSGPIPPEIGNMALLVKINLQSNLLTGRLPSELGNLKYLQELRLDRNKLQGPVPGGGSSNVASNMHEMYASNSNLTGLCRSSQLKFADFSHNFFVGSIPKCLEYLPRTSFQGNCLQGKELKQRPSVQCAGASPATSHPGVYPKHRSAEDVSKHHGASKPAWLLALEIVTGIMVGSFFLIGVLTALQKCNNKSSIIIPWKKSASEKEHMTVYIDQDMLKDVMRYSRQELEVACEDFSNIIGSSPDSVVYKGTIKGGPEIAVISLCIKEEYWTGYLELYFQREVADLARLNHENTGKLLGYCKESAPFTRMLVFEYASNGTLYEHLHYGEECQLSWTRRMKIVIGIAHGLKYLHTEIEPPFTISELNSSAVYLTEDFLPKLVDFESWKTILERSERNSGSVGSQGAVCVLPNSFEARHLDIQGNVYAFGVLLLEIISGRPPYCKDKGCLVDWARDYLEMPEVMSYVVDPELKHFKYEDLKVICEVINLCINPDPDKRPSMQELCSMLESRIDTSINVELKASSLAWAELALSS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00181 660 Gene3D Ribonuclease Inhibitor 142 265 IPR032675 -
Bva08g00181 660 Gene3D Ribonuclease Inhibitor 27 141 IPR032675 -
Bva08g00181 660 Gene3D Phosphorylase Kinase; domain 1 334 443 - -
Bva08g00181 660 ProSiteProfiles Protein kinase domain profile. 362 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00181 660 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 11 660 - -
Bva08g00181 660 SUPERFAMILY Protein kinase-like (PK-like) 343 635 IPR011009 -
Bva08g00181 660 Pfam Protein tyrosine and serine/threonine kinase 366 634 IPR001245 GO:0004672|GO:0006468
Bva08g00181 660 Gene3D Transferase(Phosphotransferase) domain 1 444 650 - -
Bva08g00181 660 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Bva08g00181 660 SUPERFAMILY L domain-like 26 235 - -
Bva08g00181 660 MobiDBLite consensus disorder prediction 255 278 - -
Bva08g00181 660 PANTHER PROTEIN MALE DISCOVERER 2 11 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00181 Bva-Chr8 887758 892724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00181 40 639 Receptor kinase-like Gene Family AT5G45780 29.335 3.90e-59 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Bva08g00181 PK_Tyr_Ser-Thr 2.5e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00181 - - pvy:116137158 1044.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00181 08 887758 892724 Bva08g00181 08 887758 892724 BWGD
Bva08g00181 08 887758 892724 Bva08g00181 08 887758 892724 ECH