Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00176 ATGGCGAAAACGTTGTTTGCGTTAAGCTGTCTTCGAAATGAGGATTGGGGTAGGCTGTCTCTGCGGCCGCATTACCCGTCGATGCCCAGGTACCCAAAGGGCGTCTCGCCGGAAGGAACCAGCGTGGAGGGCTCAGAGGCCAAGGCGCTGTTCTCGGTGATCGGAATGACTTGCTCTGCTTGCGCTGGTTCCGTCGAAAAAGCCATCAAGCGTCTTCCCGGAATTCGTGAAGCCGCCGTTGATGTTCTTAACAATAGAGCCCAGGTCTTCTTCTACCCTTCCTTCGTTAACGAGGAGACCATTCGTCAAGCTATTGAAGAAGATGCTGGCTTTGAAGCCACATTGCTTACAGATGAGACGAATGAGAGATCTGTTCAAGTATGCCGCATACGCATAAAAGGAATGACTTGCACTTCATGCTCCTCCACTGTTGAATCAGCTTTGCAAGCAATTCAAGGTGTGATAAAAGCCCAAGTGGCCTTGGCGACTGAAGAAGCAGAAGTACACTACAGgccaaatattattaactacaATCAAATATTGGAAGCCGTAGAAGACACTGGATTTGAAGCAACACTTATCAGTTCAGGTGAAGACGTTAGCAAGATAGACCTTAAGGTTGATGGTGTCCGGACCGATCGTTCCATGAGACTGATCGAGAGTTCTCTTCAGGCACTCCCAGGGATCCAAAGTATGCAAGTATATCCtgaattcaacaaaatatctctttcttaTAAACCTGAAGTGACAGGACCAAGGAATTTCATTAATGTAATTGAGGAAACTGGGTCTAGGCGTTTCAAAGCAAACATATTTCCTGAAGAAGGACGAAGAGATCCTCATAGAAGAGAggaaattaaacaatattataaatCCTTCTTATGGAGTTTGGTTTTCACTATTCCTGTCTTTCTGACCTCTATGGTCCTGATGTATATCCCTGGAACTAAGCATGGGCTGGACACCAAAGTCGTCAATATGCTTACTGTGGGGGAGATCTTAAGATGGGTGCTTGCCACGCCAGTACAGTTCATTATAGGCCGACGATTCTACTCTGGTTCCTACAAAGCCTTACGCCATGGCTCTGCTAATATGGATGTTTTGATTGCCTTGGGAACAAATGCAGCATACTTCTATTCAGTATACTCTGTGCTGAGAGCTGCTACCTCTCCAGATTTCAAGGGTACAGATTTCTTTGAGACTAGTGCGATGCTCATTTCATTTATCTTGCTTGGAAAGTATCTGGAAGTATTAGCCAAGGGGAAGACATCCAATGCAATTGCCAAGCTAATGAACCTAGCCCCCGAGACAGCTATATTGTTAACCTTAGACAGTGAAGGAAATATTGTTGGTGAACAAGAAATTGACAGCCGATTGATACAAAAGAATGATGTGATAAAAGTTATTCCCGGTGCAAAAGTAGCTTCAGATGGTTTTGTTATTTGGGGACAGAGCCACGTGAATGAGAGCATGATAACAGGAGAGGCACGTCCTGTGGCAAAGAGGAAGGGAGACACCGTTATAGGAGGAACTGTGAATCAGAATGGAGTTTTGCATGTCAAGGCAACACGGGTTGGATCAGAGAGTGCTCTTTCTCAAATTGTTCGACTTGTAGAGTCAGCACAGATGGCCAAGGCTCCCGTGCAGAAGTTTGCCGACcgtatttcaaaatattttgtgcCCCTGgTCATTTTCATCTCAGTTTCAACATGGTTCTCCTGGTTTCTAGCTGGGAGGTTTCATTCTTATCCAAAATCTTGGATACCATCTTCCATGGACAGCTTTGAGCTAGCTTTGCAGTTTGGGATTTCTGTCATGGTCATCGCCTGTCCTTGTGCTCTAGGTCTCGCGACCCCAACTGCTGTTATGGTTGGCACCGGTGTTGGTGCATCTCAAGGAGTACTGATCAAAGGAGGGCAAGCATTAGAAAACGCACATAAGGTGGACTGCATTGTTTTTGACAAGACAGGTACTCTTACCATTGGGAAGCCTGTGGTTGTAAGCACAAAACTGCTGACGAATATGGTGCTTCGGGATTTCTATGAACTTATTGCTGCGGCCGAGGTGAATAGCGAGCATCCACTAGCCAAGGCCATAGTTGAGTACGCCAAAAAATTCAGAGAAGATGAGGAGAACCCTCTCTGGCCAGAAGCTCGGGATTTTGTCTCCATTACTGGCCATGGTGTGAAGGCCACTGTCCGGAATAAGGAAATAATTGTGGGTAACAAGAGTTTGTTGTCTGAACACAACGTTGCAATTCCTGCTGATGCTGAAGATATACTGGCAGAAGCTGAGGGGTTGGCTCAAACTGGAATTCTGGTATCTATAAATGGGGAAGTGACTGGGATTTTAGCAATATCTGACCCATTAAAACCAGGAGCTCAAGAAGTCATTTCCATTCTCAAATCTATGAATATTAGGAGCATCATGGTGACTGGTGACAACTGGGGAACTGCTAATTCTATGGCTAGGGAAGTTGGAATTGAAACTGTTATTGCTGAGTCCAAACCGGAGCAGAAAGCAGAGCAAGTGAAGGATTTGCAGgGTTCTGGGCATACAGTGGCGATGGTGGGTGATGGTATCAATGATTCACCAGCACTTGTGGCAGCAGACGTGGGAATGGCAATTGGAGCTGGGACCGACATTGCTATTGAGGCAGCTGATATTGTTCTCATGAAAAGCAACTTGGAAGATGTGATAACTGCCATTGACCTTTCCAGAAAAACATTCTCTCGTATCCGTCTAAATTACTTCTGGGCTTTGGGTTATAATCTGCTTGGCATTCCAATTGCCGCTGGAGctctttttccttctacaGGATTTCGATTACCACCATGGATTGCTGGAGCTGCAATGGCAGCCTCTTCCGTGAGTGTTGTTTGCTGTTCTCTCTTGTTGAAGTATTACAGGAGACCCAAGAAGCTGGACAACCTTGAGATTCGGGGCATAAGGATTGAGTA 2960 0.4446 MAKTLFALSCLRNEDWGRLSLRPHYPSMPRYPKGVSPEGTSVEGSEAKALFSVIGMTCSACAGSVEKAIKRLPGIREAAVDVLNNRAQVFFYPSFVNEETIRQAIEEDAGFEATLLTDETNERSVQVCRIRIKGMTCTSCSSTVESALQAIQGVIKAQVALATEEAEVHYRPNIINYNQILEAVEDTGFEATLISSGEDVSKIDLKVDGVRTDRSMRLIESSLQALPGIQSMQVYPEFNKISLSYKPEVTGPRNFINVIEETGSRRFKANIFPEEGRRDPHRREEIKQYYKSFLWSLVFTIPVFLTSMVLMYIPGTKHGLDTKVVNMLTVGEILRWVLATPVQFIIGRRFYSGSYKALRHGSANMDVLIALGTNAAYFYSVYSVLRAATSPDFKGTDFFETSAMLISFILLGKYLEVLAKGKTSNAIAKLMNLAPETAILLTLDSEGNIVGEQEIDSRLIQKNDVIKVIPGAKVASDGFVIWGQSHVNESMITGEARPVAKRKGDTVIGGTVNQNGVLHVKATRVGSESALSQIVRLVESAQMAKAPVQKFADRISKYFVPLVIFISVSTWFSWFLAGRFHSYPKSWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALENAHKVDCIVFDKTGTLTIGKPVVVSTKLLTNMVLRDFYELIAAAEVNSEHPLAKAIVEYAKKFREDEENPLWPEARDFVSITGHGVKATVRNKEIIVGNKSLLSEHNVAIPADAEDILAEAEGLAQTGILVSINGEVTGILAISDPLKPGAQEVISILKSMNIRSIMVTGDNWGTANSMAREVGIETVIAESKPEQKAEQVKDLQGSGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYFWALGYNLLGIPIAAGALFPSTGFRLPPWIAGAAMAASSVSVVCCSLLLKYYRRPKKLDNLEIRGIRIE 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00176 986 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 405 940 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva08g00176 986 Gene3D - 619 914 IPR023214 -
Bva08g00176 986 CDD P-type_ATPase_Cu-like 291 967 - -
Bva08g00176 986 SUPERFAMILY Calcium ATPase, transduction domain A 452 538 IPR008250 -
Bva08g00176 986 Gene3D - 659 737 IPR023299 GO:0000166
Bva08g00176 986 Gene3D - 738 788 IPR023299 GO:0000166
Bva08g00176 986 SUPERFAMILY HMA, heavy metal-associated domain 44 118 IPR036163 GO:0046872
Bva08g00176 986 Pfam E1-E2 ATPase 451 630 - -
Bva08g00176 986 PRINTS Copper-transporting ATPase 1 signature 74 97 - -
Bva08g00176 986 PRINTS Copper-transporting ATPase 1 signature 48 73 - -
Bva08g00176 986 PRINTS Copper-transporting ATPase 1 signature 150 171 - -
Bva08g00176 986 CDD HMA 51 114 IPR006121 GO:0046872
Bva08g00176 986 Gene3D - 201 263 - -
Bva08g00176 986 ProSiteProfiles Heavy-metal-associated domain profile. 202 263 IPR006121 GO:0046872
Bva08g00176 986 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 365 966 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bva08g00176 986 Gene3D - 126 198 - -
Bva08g00176 986 Gene3D - 43 115 - -
Bva08g00176 986 SUPERFAMILY HAD-like 651 963 IPR036412 -
Bva08g00176 986 PRINTS P-type cation-transporting ATPase superfamily signature 880 892 - -
Bva08g00176 986 PRINTS P-type cation-transporting ATPase superfamily signature 804 814 - -
Bva08g00176 986 PRINTS P-type cation-transporting ATPase superfamily signature 652 666 - -
Bva08g00176 986 PRINTS P-type cation-transporting ATPase superfamily signature 782 793 - -
Bva08g00176 986 PRINTS P-type cation-transporting ATPase superfamily signature 857 876 - -
Bva08g00176 986 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Bva08g00176 986 ProSitePatterns Heavy-metal-associated domain. 53 82 IPR017969 GO:0046872
Bva08g00176 986 ProSitePatterns E1-E2 ATPases phosphorylation site. 654 660 IPR018303 -
Bva08g00176 986 TIGRFAM TIGR00003: copper ion binding protein 130 191 IPR006122 GO:0005507
Bva08g00176 986 TIGRFAM TIGR00003: copper ion binding protein 50 113 IPR006122 GO:0005507
Bva08g00176 986 SUPERFAMILY HMA, heavy metal-associated domain 124 197 IPR036163 GO:0046872
Bva08g00176 986 Pfam Heavy-metal-associated domain 130 190 IPR006121 GO:0046872
Bva08g00176 986 Pfam Heavy-metal-associated domain 51 112 IPR006121 GO:0046872
Bva08g00176 986 SUPERFAMILY HMA, heavy metal-associated domain 197 265 IPR036163 GO:0046872
Bva08g00176 986 PANTHER ATP7, ISOFORM B 2 977 - -
Bva08g00176 986 SFLD C1.7: P-type atpase like 634 909 - -
Bva08g00176 986 ProSiteProfiles Heavy-metal-associated domain profile. 48 107 IPR006121 GO:0046872
Bva08g00176 986 Pfam haloacid dehalogenase-like hydrolase 648 871 - -
Bva08g00176 986 ProSiteProfiles Heavy-metal-associated domain profile. 127 193 IPR006121 GO:0046872
Bva08g00176 986 ProSitePatterns Heavy-metal-associated domain. 132 161 IPR017969 GO:0046872
Bva08g00176 986 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 2 977 - -
Bva08g00176 986 Gene3D - 420 542 - -
Bva08g00176 986 CDD HMA 130 192 IPR006121 GO:0046872
Bva08g00176 986 SFLD p-type atpase 634 909 IPR044492 -
Bva08g00176 986 SUPERFAMILY Calcium ATPase, transmembrane domain M 397 930 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00176 Bva-Chr8 865623 871028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00176 1 986 Primary Pumps ATPases AT1G63440 76.761 0.0 1560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00176 K17686 - gmx:100810141 1660.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00176 08 865623 871028 Bva08g00176 08 865623 871028 ECH