Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00170 ATGGATGGGAGAGAAGCTATGGCATTCTCTGGTGGCTCTGCTTCATATTACATACATAGGGGAGGAATTGCTGGGTCTGGCCCTGGAACGCAAGTAGGGGGTTTCCAGTCACCCCCAGGGTTCAGAGCTCTGTCCAATTCTGGCGTTCCGGATCAGTCAAATGTCCGGAGTGGCTCAGTTGGTTCTACATTTTCAGTGGAGCCTCCACGTGCCAATTTTAGTCATGGCATTAACATGAGTGCCACTCCTGGAGTACCTTCAAGCGAGcctgtgaaaaagaaaagagggaggCCCCGTAAATACGGTCCTGATGGACCAGTTTCTTTGGGACTGTCTCCAATGTCCAACAACGCCAATTCCACTCCAGGTTCAAGCACACCATCCAACAAACGGAATAGAGGGCGCCCTCCTGGGAGTGGAAGGAAGCAACAGTTAGCGACTCTAGGTGAATGGATGAACAATTCAGCAGGACTGGCTTTTGCACCTCATGTTATCACCGTTGGAGTAGGAGAGGATATTGTAGCAAAGTTACTGTCTCTATCACAGGAAAGACCAAGGGCACTGTGCATCTTGTCAGGCACTGGAACAGTTTCTTCAGTTACACTACGACAGCCTGCTTCTACTGGTGTCAGTGTTACTTATGAGGGCAGATTCCAAATATTGTGCTTGTCTGGTTCCTACTTGGTTGCCGAGGATGGTGGACCACGAGATAGAACAGGTGGTGTGAGCGTTTCCCTTTCTAGTCCCGATGGTCATGTTATTGGTGGTGGTGTTGCTGTGCTTATTGCTGCAAGTCCAGTACAGGTGGTTGTGTGCAGTTTTGTATATGGAGGCTCTAAGATGAAGACTAAGCAAGTGACGGCTCCCAAAGATGAGGACAGTTCTGAGCCACAGCATGTTGATAAGTTAGCTACTGCTACTCCAGCTAGTGCTCCACCCTCCCAAAATTACACGCCTTCTGCAACAGGGTTAAGTAACAGTCTTGACTTGTTCGGTAAGATGAACGCAGATAAGCATCTTGGACGTTTTACTTTAAAACTAAGCTCAGATTTCCCGTTCATGAACTTGGTTaccttatataattttgcGTACCTTAAGAAAGGCATCGAATGTTTGTTTCTATA 1124 0.4617 MDGREAMAFSGGSASYYIHRGGIAGSGPGTQVGGFQSPPGFRALSNSGVPDQSNVRSGSVGSTFSVEPPRANFSHGINMSATPGVPSSEPVKKKRGRPRKYGPDGPVSLGLSPMSNNANSTPGSSTPSNKRNRGRPPGSGRKQQLATLGEWMNNSAGLAFAPHVITVGVGEDIVAKLLSLSQERPRALCILSGTGTVSSVTLRQPASTGVSVTYEGRFQILCLSGSYLVAEDGGPRDRTGGVSVSLSSPDGHVIGGGVAVLIAASPVQVVVCSFVYGGSKMKTKQVTAPKDEDSSEPQHVDKLATATPASAPPSQNYTPSATGIWHGARAHTGIDLMRG 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00170 339 CDD DUF296 162 274 IPR005175 -
Bva08g00170 339 ProSiteProfiles PPC domain profile profile. 157 295 IPR005175 -
Bva08g00170 339 SUPERFAMILY AF0104/ALDC/Ptd012-like 160 276 - -
Bva08g00170 339 MobiDBLite consensus disorder prediction 40 85 - -
Bva08g00170 339 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 326 IPR039605 GO:0003680
Bva08g00170 339 MobiDBLite consensus disorder prediction 110 133 - -
Bva08g00170 339 MobiDBLite consensus disorder prediction 19 143 - -
Bva08g00170 339 Pfam Plants and Prokaryotes Conserved (PCC) domain 162 275 IPR005175 -
Bva08g00170 339 Gene3D - 162 290 - -
Bva08g00170 339 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00170 Bva-Chr8 843088 846926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00170 1 312 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 54.867 7.36e-100 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00170 - - zju:107429897 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00170 08 843088 846926 Bva08g00170 08 843088 846926 BWGD
Bva08g00170 08 843088 846926 Bva08g00170 08 843088 846926 ECH