Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00167 ATGGGTTGTGAGTTTTCCAAGTTCTCGGCATGCTGCTGGGGCACAGAGCAAAATGGCCCTGTTCCTGAGGCCGCCATCAATGaaaatgaagagaagagtGATGCCAATGATTTGCCACCATTCCATGAATACACAATTGATCAACTTAGGAAGGCTACTTCTGGATTTGCAGTAGAAAATATAGTTTCTGAACATGGAGAAAAGGCTCCAAACGTGGTCTACAAAGGGAAGCTTGAAAATCAATTGCGCATTGCTGTCAAACGGTTCAATAGATCAGCCTGGCCGGATTCCCGGCAATTTTTgGAAGAAGCCAGGGCTGTTGGTCAGCTCAGGAACCAAAGATTGGTAAATCTACTTGGGTGTTGCTGTGAAGGTGAAGAGAGGTTACTTGTTGCAGAATATATGCCGAATGATACTTTGGCAAAACACTTGTTTCATTGGGAAACACAGCCTATGAAATGGGCAATGAGACTAAGAGTTGCTTTACACCTTGCCCAAGCTCTAGAATACTGTACCAGCAAAGGGCGTGCTCTATACCATGATCTGAATGCTTACAGAGTTCTTTTTGATGATGAAGCTAATCCTAGACTATCATGCTTTGGTCTGATGAAAAACAGTCGAGATGGGAAAAGTTATAGTACAAACCTTGCGTTTACTCCTCCTGAGTATCTGAGAACAGGTAGAGTTACTCCAGAAAGTGTAACGTATAGCTTTGGGACCCTTTTGCTTGACCTTCTCAGTGGAAAGCATATTCCTCCTAGCCATgCACTTGACCTTATTCGGGACAGGAATCTTCAAATGCTAACAGACTCTTGTTTGGAAGGACAATTTTCAAATGACGAGGGGACTGAGTTAGTGCGTTTAGCATCACGATGTTTGCAATCTGAACCACGAGAACGTCCTAACCCAAAGTCATTGGTTACTGCTTTAATACCTCTACAGAAGGATTCTGAGGTTCCTTCTCATGTCCTAATGGGTATACCACATAGTGCGGCTTCTTTTCCTCTGTCTCCACTTGGTGAAGCTTGTCTGAGAATGGATTTGACTGCCATACACGAAGTCTTAGAAAAGATTGGATATAAAGATGATGAGGGTGCTGCAACTGAGCTTTCGTTCCAAATGTGGACCAACCAGATGCAGGAAACATTGAACTCGAAGAAGAAGGGTGACTCTGCTTTTCGGAATAAAGACTTTAAGGCTGCAATTGATACCTACACGCAGTTCATTGATGTTGGAACCATGCTTTCTCCTACGATTTATGCACGTCGTAGCCTGGCATATCTCATGAACGATATGCCTGAGGAAGCACTTCATGATGCATCGCAGGCACAAATAATTTCTCCAGTCTGGTACATTGCATCCTATTTACAAGCTGTTGCTCTTTTGGCACTGGGCAGGGAGAGTGAGGCCCAAGTGGCACTTAAGGAGGGTTCTGCACTAGAAACTAAGAAGAACACAAATTA 1463 0.4327 MGCEFSKFSACCWGTEQNGPVPEAAINENEEKSDANDLPPFHEYTIDQLRKATSGFAVENIVSEHGEKAPNVVYKGKLENQLRIAVKRFNRSAWPDSRQFLEEARAVGQLRNQRLVNLLGCCCEGEERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHLAQALEYCTSKGRALYHDLNAYRVLFDDEANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSNDEGTELVRLASRCLQSEPRERPNPKSLVTALIPLQKDSEVPSHVLMGIPHSAASFPLSPLGEACLRMDLTAIHEVLEKIGYKDDEGAATELSFQMWTNQMQETLNSKKKGDSAFRNKDFKAAIDTYTQFIDVGTMLSPTIYARRSLAYLMNDMPEEALHDASQAQIISPVWYIASYLQAVALLALGRESEAQVALKEGSALETKKNTN 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00167 487 SUPERFAMILY Protein kinase-like (PK-like) 35 320 IPR011009 -
Bva08g00167 487 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 487 IPR045845 GO:0004672|GO:0009742
Bva08g00167 487 SUPERFAMILY TPR-like 386 480 IPR011990 GO:0005515
Bva08g00167 487 Gene3D Transferase(Phosphotransferase) domain 1 136 327 - -
Bva08g00167 487 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00167 487 Gene3D Phosphorylase Kinase; domain 1 29 134 - -
Bva08g00167 487 PANTHER TPR DOMAIN KINASE 1 487 - -
Bva08g00167 487 Gene3D Tetratricopeptide repeat domain 376 487 IPR011990 GO:0005515
Bva08g00167 487 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00167 Bva-Chr8 817670 824465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00167 21 310 Glycoside Hydrolase AT3G07070 33.648 1.42e-42 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Bva08g00167 PK_Tyr_Ser-Thr 2.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00167 K14500 - jre:109014463 860.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00167 08 817670 824465 Bva08g00167 08 817670 824465 ECH