Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00158 ATGGTAGCGGAGAATCTGAAGAAACAACTTGCTTTGGCTGTTAGAAACATCCAGTGGAGCTACGCGGTCTTCTGGACTGTTTCAGCCAGCCAAATAGGAGTTTTGGAGTGGGGTGAAGGATATTACAATGGCGATATCAAAACTAGGAAAACAAGTCAAGCAGTAGAACTTAATTCGGACCAAATAGGTTTGCAGAGAAGCGAGCAGCTGAGAGAGTTATATGAGTCCCTTGCAATTGCAGAAGCCAGCCCGCAAGCTAAACGGCCTTCGGCGGCACTATCACCTGAAGATCTTACAGATACGGAATGGTATTACTTGGTTTGTATGTCCTTTGTGTTCAACATTGGCCAAGGGTTACCAGGGAGAACCCTAGCGAATGGCCAACCCATTTGGCTGTATAATGCCCCTTTTGCTGATAGTAGAGTCTTTAGTCGATCCCTTCTGGCAAAGAGTGCGTCCATTCAGACAGTGGTGTGCTTTCCTTTTCTGGATGGTGTTATCGAGCTAGGTGCAACTGATCTGGTTTCAGAAAATCTCAGTCTCATTCAACATATAAGAACTTCTTTCTTGGATATTTTGGACTCCAAGATTCCAGAAAAGTTTGGAGCTGTATTTAACACAAGAAATGACAGGGATGATGCTTGTGTAGCTTTTGATCATAATGCTTTTGACATTAAATTAACTTCAGAAGTAGGATGTGAAGTACCCAAGATAAGTTCTCCTAATAGTAGTTCGAATGCATTTGAAGCCAATCAAGCAGCTGACGAGGGAATCATGGTTGAAGGGGTAAATGGAGGCGCTTCCCAAGTCCAAAGCTGGCAAGTACTGGATGACGAATTGAGTAATTGTGTTCATAATTCCATGAATTCTAGCGACTGTGTATCTCAAACTTTTGCCAGTCCTGAAAAGGTTACCCCTGTTCTCAAGGGTGAAAACCCAATTGACCATTGTGCACAAGACCTTCAGGAGTGCAATAACACAAAAATGACTTCGATGGATCTCCGTCGTGATCATCAGCATTATCAGACAGTTCTTTCTACCCTTCTAAAGAACTCAGACCAGTTACTTATGGGACCCCGTGTTAAAAATTCTCATCAAGAGTCTAGCTTCATCAGTTGGAAGAGAGAAGGATTAATGGGGCCAAGTCGAGGAGCCCCACAAATGGTATTGAAAAAGGTACTGTTTCAAGTTCCTCGGATGCACCTGGATGGGCTGCTCGAGtctcaagaagaaaatgactaTAAGGAGGGAATGAAACCAGAGGCTGATGAGATTGGCATGAACCACGTGTTGTcagaaagaaggagaagagcaAAACTAAATGAAAGATTCTTAATTCTTAGATCAATTATCCCTTCAATTAGTAagGATGACAAAGTTTCAATACTAGATGATGTAATAGAGTATCTTAGAAAGCTTGAGAAAAAGGTCAAAGACTTGGAGGACCACAGGGAGCTAGTAGATTTAGAGACTAGAACTAAAAGAACAACTCCTCAAGATATGGTGGAGAGGACTtctgataattattttaacaacaAAACTGATAGTGGTAAGAAGCCACTCAAGAGGAAGGCTTGTGACATTGATGAGACTGGGCGAGAGATTGACTCCATTGGGTCAAAAGACACTTGTAATGTTACTATCAATATAAGGGACAATGAAGTTCTGATTGAAATGAAGTGTTCTTGGAGAGAAGGAGCGCTGCTGGAAATTATGGAAGCAGTAAGCAGTCTCCATTTAGATTTGCATTCTATTCAGTCATCAAAAGCTGATGGAAATCTTTGCCTGACCATTAAGTCAAAGTTTAGAGGATCGACTCTAGCATCCGCGAAAAAGATCAAACAAGCACTCCACAAAGTGGCTTGCAAGTGtta 1874 0.4077 MVAENLKKQLALAVRNIQWSYAVFWTVSASQIGVLEWGEGYYNGDIKTRKTSQAVELNSDQIGLQRSEQLRELYESLAIAEASPQAKRPSAALSPEDLTDTEWYYLVCMSFVFNIGQGLPGRTLANGQPIWLYNAPFADSRVFSRSLLAKSASIQTVVCFPFLDGVIELGATDLVSENLSLIQHIRTSFLDILDSKIPEKFGAVFNTRNDRDDACVAFDHNAFDIKLTSEVGCEVPKISSPNSSSNAFEANQAADEGIMVEGVNGGASQVQSWQVLDDELSNCVHNSMNSSDCVSQTFASPEKVTPVLKGENPIDHCAQDLQECNNTKMTSMDLRRDHQHYQTVLSTLLKNSDQLLMGPRVKNSHQESSFISWKREGLMGPSRGAPQMVLKKVLFQVPRMHLDGLLESQEENDYKEGMKPEADEIGMNHVLSERRRRAKLNERFLILRSIIPSISKDDKVSILDDVIEYLRKLEKKVKDLEDHRELVDLETRTKRTTPQDMVERTSDNYFNNKTDSGKKPLKRKACDIDETGREIDSIGSKDTCNVTINIRDNEVLIEMKCSWREGALLEIMEAVSSLHLDLHSIQSSKADGNLCLTIKSKFRGSTLASAKKIKQALHKVACKC 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00158 624 PANTHER TRANSCRIPTION FACTOR TT8 4 620 - -
Bva08g00158 624 PANTHER TRANSCRIPTION FACTOR EGL1 4 620 - -
Bva08g00158 624 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 426 488 IPR036638 GO:0046983
Bva08g00158 624 Pfam Helix-loop-helix DNA-binding domain 428 474 IPR011598 GO:0046983
Bva08g00158 624 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 424 473 IPR011598 GO:0046983
Bva08g00158 624 SMART finulus 430 479 IPR011598 GO:0046983
Bva08g00158 624 Gene3D - 427 497 IPR036638 GO:0046983
Bva08g00158 624 Coils Coil 463 490 - -
Bva08g00158 624 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 189 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00158 Bva-Chr8 766809 771055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00158 2 624 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 50.306 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva08g00158 bHLH-MYC_N 3.4e-52 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00158 - - gmx:100808167 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00158 08 766809 771055 Bva08g00158 08 766809 771055 ECH