Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00141 ATGGCAGCATGGTCAACTTTCACAAATGGGTCGTCCATAGATAGCCTTGAAATTCTTACTGCGTGGCAGGGTAAAGGCTGTTTCCTTAACCTTGATCATTTAGTAAAAGACCATGTTGGTGATGCTAAGGATGATAAAGCTAAAGAAAAATGCTTGTTTTACCAACTTCTTTTGGTTCACATTGAAGAGATTTCTTCTAGAGGCACTACCCGGCCCCTGCCAGTAATGCTTGGTAATGGTCAATCGTTGGATCTGTACAAACTGTTCTCCTATGTGAAGGAAAAAGGTGGCTATTCTTTGGTGTCGAAGAAAGGGTTGTGGGATTCTGTGACAAAGAAATTGGATTTGAACCTTGAAGTTCTGGCTTCTGCGAGATTAATTTACGAGAAGTATCTAAATGAGTTTGAAGGATGGCTCAGGGAAACTATTGGTGGAAAGCATGTCAAAATTGGTTATCATGGAGGCCGTTGTGGGTTTAACTCATCGCCTATAGAGCTTGAGAATGAGTTTGGTGCTTTATCAAATCTGAACCGAAGTTG 539 0.4119 MAAWSTFTNGSSIDSLEILTAWQGKGCFLNLDHLVKDHVGDAKDDKAKEKCLFYQLLLVHIEEISSRGTTRPLPVMLGNGQSLDLYKLFSYVKEKGGYSLVSKKGLWDSVTKKLDLNLEVLASARLIYEKYLNEFEGWLRETIGGKHVKIGYHGGRCGFNSSPIELENEFGALSNLNRS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00141 179 CDD ARID 53 136 - -
Bva08g00141 179 Gene3D - 36 147 IPR036431 GO:0003677
Bva08g00141 179 ProSiteProfiles ARID domain profile. 47 140 IPR001606 GO:0003677
Bva08g00141 179 SMART bright_3 48 141 IPR001606 GO:0003677
Bva08g00141 179 PANTHER ARID/BRIGHT DNA-BINDING DOMAIN PROTEIN 31 155 - -
Bva08g00141 179 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 31 155 - -
Bva08g00141 179 Pfam ARID/BRIGHT DNA binding domain 62 136 IPR001606 GO:0003677
Bva08g00141 179 SUPERFAMILY ARID-like 47 141 IPR036431 GO:0003677
Bva08g00141 179 SMART ARID_2 44 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00141 Bva-Chr8 692413 693734 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Bva08g00141 ARID 4.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00141 - - lang:109333235 160.614