Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00139 ATGGGTGGTTGCTGTTGTTGTTcttctaaaagaaatgaattgaATGGTCCCCCAACATACTTCTATCAGTATCCAAGAGCATCAGACGAGCATATTCCACTATCATCTTACGAGGTGCCTGCCCCAGCTTTCGCTGGGGGACTCCTAGTTGATACTAATCTCGACACTTCAATTCCTGATACCTATAGACCACCTCCTGCTCCTATCCCTTTCGATGCTACATTCACTGTTAGTCAAACTCCACCTTTGGCTCAAGAAATTTGTGGCGACAAGACTAATGAATCCCTACATTCTACAAATTCTAATTCAGTTCAAGAAACAGTTTCTGGTAACGATCATGGACCTGTAGATATGTTGAAAGAGCTGAAGGAATCAGATAACAAAATCCAGGCAGATTTAGAACTTGACTCATCAAAGGATGCAGAAATTCAACTTCCAGAGTTGGCGAAACCTATCATTTTAGAAGAGGAGGATGGATGTCCAATTTGTTTAGAAGAGTATGATGCAGAAAATCCAAAGCTCACCGCAAAATGCGACCATCATTTTCACCTTGCTTGCATTCTGGAATGGATGGAAAGAAGTGAAACCTGTCCTGCATGTGATCAGGATATGGTTTTCAACCCTCCAATTGAGTA 635 0.4079 MGGCCCCSSKRNELNGPPTYFYYPRASDEHIPLSSYEVPAPAFAGGLLVDTNLDTSIPDTYRPPPAPIPFDATFTVSQTPPLAQEICGDKTNESLHSTNSNSVQETVSGNDHGPVDMLKELKESDNKIQADLELDSSKDAEIQLPELAKPIILEEEDGCPICLEEYDAENPKLTAKCDHHFHLACILEWMERSETCPACDQDMVFNPPIE 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00139 210 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 210 - -
Bva08g00139 210 MobiDBLite consensus disorder prediction 93 116 - -
Bva08g00139 210 SUPERFAMILY RING/U-box 149 206 - -
Bva08g00139 210 Pfam Ring finger domain 159 199 IPR001841 -
Bva08g00139 210 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 136 205 IPR013083 -
Bva08g00139 210 ProSiteProfiles Zinc finger RING-type profile. 159 200 IPR001841 -
Bva08g00139 210 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 210 - -
Bva08g00139 210 SMART ring_2 159 199 IPR001841 -
Bva08g00139 210 MobiDBLite consensus disorder prediction 93 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00139 Bva-Chr8 688568 691473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00139 1 206 C3H Transcription Factor Family AT5G41350 52.830 3.64e-71 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00139 - - gmx:100816369 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00139 08 688568 691473 Bva08g00139 08 688568 691473 ECH