Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00134 ATGGGATTTCCTGTGGGATATACAGAGCTCGTCTTCCCAAAACTTTTCCTTCACATCCTTTCCATATTGGGTTTCATCAGAAAACTTATATCCATCGTGTTCCGCTATCTGGGTCTCCAGGATTTCCTTGAACCGGATATTGCGTGGCCGGAGCACTGGAACCGGGTGCCCGAATTCCAATCCGTTTCTGCACTGCTGATCCGAGAAATCTTGCCGGTGGTCAAGTTCTCAGACCTGTCAATGGAACTGGACCCTCCCGATACCTGCGCTGTCTGTCTCTATGAATTTCAGGCTCAACACGAGATCAGACGCCTCACAAACTGTCCACACATCTTCCACCGGAGCTGCCTGGACCGTTGGATGGGATACGACCAGAGAACCTGTCCCTTGTGCCGGACACCAGTCATACCTCACGATATGCAAGGTGCCTTCAATGAGAGACTCTGGGCTGCTTCTGGCATCCCTGAATTGTACGCAGATTATCCTCATACTACTGCTTTTTA 503 0.503 MGFPVGYTELVFPKLFLHILSILGFIRKLISIVFRYLGLQDFLEPDIAWPEHWNRVPEFQSVSALLIREILPVVKFSDLSMELDPPDTCAVCLYEFQAQHEIRRLTNCPHIFHRSCLDRWMGYDQRTCPLCRTPVIPHDMQGAFNERLWAASGIPELYADYPHTTAF 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00134 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 56 137 IPR013083 -
Bva08g00134 167 Pfam Ring finger domain 87 132 IPR001841 -
Bva08g00134 167 PANTHER BRH1 RING FINGER PROTEIN 1 161 - -
Bva08g00134 167 ProSiteProfiles Zinc finger RING-type profile. 89 132 IPR001841 -
Bva08g00134 167 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 161 - -
Bva08g00134 167 SMART ring_2 89 131 IPR001841 -
Bva08g00134 167 SUPERFAMILY RING/U-box 88 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00134 Bva-Chr8 670826 671729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00134 1 153 C3H Transcription Factor Family AT1G63840 56.051 5.69e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00134 K16281 - jre:109014495 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00134 08 670826 671729 Bva08g00134 08 670826 671729 BWGD
Bva08g00134 08 670826 671729 Bva08g00134 08 670826 671729 ECH