Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00120 ATGATAATCACTGAGAAGAATCGTCGGGAGATCTGCAAATACCTTTTCCAAGaGGGAGTTTGCTATGCAAAGAAAGACTTCAATCTGGCAAAACACCCTGAGATTGATGTGCCGAATCTGCAGGTGATTAAGTTGATGCAGAGCTTCAAGTCGAGGGAATACGTGCGTGAGACCTTTGCCTGGATGCACTATTACTGGTTTCTCACTAATGATGGCATTGAGTTCCTTAGAAATTACCTCAATCTTCCTTCCGAAATTGTGCCTGCTACTTTAAAGAAACAAGCAAAGCCCGCTGGTAGGCCATTCGGTGGCCCACCTGGTGATCGTCCTAGGGGTCCCCCTCGCTTTGAAGgagaaaggagatttggtgaTCGGGATGGATACCGTCGAGGTTCTCAAGGACCTGGTGGTGACTTCGGAGATAAGGGTGGAGCACCGGCTGACTACAGGCCTTCTTTTGGGGCTCCTGGTGGAAGACCTGGCTTTGGACGCGGTTCTGGTGGTTACGGAGCAGCAACTAGTTCAAGTTCAAATCTTTCTTA 542 0.4723 MIITEKNRREICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRNYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRRGSQGPGGDFGDKGGAPADYRPSFGAPGGRPGFGRGSGGYGAATSSSSNLS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00120 180 PANTHER 40S RIBOSOMAL PROTEIN S10 1 179 IPR037447 -
Bva08g00120 180 MobiDBLite consensus disorder prediction 112 128 - -
Bva08g00120 180 MobiDBLite consensus disorder prediction 92 180 - -
Bva08g00120 180 Pfam Plectin/S10 domain 3 94 IPR005326 -
Bva08g00120 180 Gene3D - 1 104 IPR036388 -
Bva08g00120 180 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00120 Bva-Chr8 619960 621635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00120 1 153 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 80.519 5.15e-75 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00120 K02947 K09422 zju:107430209 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00120 08 619960 621635 Bva08g00120 08 619960 621635 BWGD
Bva08g00120 08 619960 621635 Bva08g00120 08 619960 621635 ECH