Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00110 atgGATGAGCTTGCATACTTGATGGACTGGGATTTGCAAGCTATTGTGAAGGGATGCACCAGTGAGGCCCCTGCTACCATCATGGACAGCCCTGCACaccttgatttttcttatttctgttCTGAGCAAGATAACATACTTCTAACTTTTCCAGAAATTTCAGAAACCTCAAGTGTCCTTGATGAGTTGGAGGAACTTTACAAGCCTTTCTACCCTGTTTTGCACCCTCTTTCGACGCAAACCATTAATGTTACATCTTCCGAACCCATCCCCAAGGAAGTCAAAGCATCAGATCAAGTACAAGAATTGAAAGGTCCCCAAGTATCTGATTGTAAAAAGAGaaagaagaagcaaaacaaGAAGGAGGTGAAGGAGGTGAGGGCAGATGAGCTGAGTGACACATGGGCATGGCGTAAATATGGGCAGAAACCAATTAAGGGATCACCCTATCCTCGAAGCTATTACAGATGCAGCAGCTTCAAAGGATGCTCAGCTAGGAAGCAGGTGGAGCGGAGCCATTTGAATCCCAGTGCTTTCATCATCACTTACACTGCAGAACACATCCACCCTCACCCAACTCGCAGAAATTCACTTGCTGGAACCACCCGTAATAGGAAGAACAAACTCATCACAAACACACCTGAATCTACTGATCAAACCATTGAAGACACATGCTCTACAAAAACAAGTGAGGTAGGAtccattgaaaaagaaaatcagctTGAATTGTTGGATGATGCTCAAGGTCAACAAGGTCCAGAGACTGCCATAGAAGTGGAAGATGATTGGTTTGCAAGTATAGAGGAATTAAACCAACTTAGCCAACAACTTGCATTCGACCCAGCTTGCTTTATGGATGCTTTTCCTTA 869 0.4154 MDELAYLMDWDLQAIVKGCTSEAPATIMDSPAHLDFSYFCSEQDNILLTFPEISETSSVLDELEELYKPFYPVLHPLSTQTINVTSSEPIPKEVKASDQVQELKGPQVSDCKKRKKKQNKKEVKEVRADELSDTWAWRKYGQKPIKGSPYPRSYYRCSSFKGCSARKQVERSHLNPSAFIITYTAEHIHPHPTRRNSLAGTTRNRKNKLITNTPESTDQTIEDTCSTKTSEVGSIEKENQLELLDDAQGQQGPETAIEVEDDWFASIEELNQLSQQLAFDPACFMDAFP 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00110 289 Pfam WRKY DNA -binding domain 133 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g00110 289 SMART WRKY_cls 131 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g00110 289 MobiDBLite consensus disorder prediction 195 221 - -
Bva08g00110 289 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 270 IPR044810 GO:0003700
Bva08g00110 289 MobiDBLite consensus disorder prediction 94 120 - -
Bva08g00110 289 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 9 270 - -
Bva08g00110 289 Gene3D WRKY domain 111 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva08g00110 289 ProSiteProfiles WRKY domain profile. 126 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g00110 289 SUPERFAMILY WRKY DNA-binding domain 127 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva08g00110 289 MobiDBLite consensus disorder prediction 191 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00110 Bva-Chr8 575041 575385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00110 1 208 WRKY Transcription Factor Family AT4G23550 49.554 7.57e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva08g00110 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00110 K13426 - gmx:102663255 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00110 08 575041 575385 Bva08g00110 08 575041 575385 BWGD
Bva08g00110 08 575041 575385 Bva08g00110 08 575041 575385 ECH
Bva08g00110 08 575041 575385 Bva03g01303 03 12690280 12692011 ECH
Bva08g00110 08 575041 575385 Bva04g01197 04 8169888 8171305 ECH
Bva08g00110 08 575041 575385 Bva08g01861 08 12592000 12593690 ECH