Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00100 ATGGAGCAGAAGAGCCTTCTTCTATCGGCGCTGAGTGTTGGGGTGGGCGTGGGTGTGGGGATTGGCTTGGCTTCGGGACAAAGCGCTAGCAAAGGGGGAGCCAATGGTTCTTCCTCAAACGCCATTACTGCCGAGAGGATGGAGCAGGAAATGCTCCGACTAGTAATTGATGGAAGAGAGACCAAGATCACCTTTGATCAATTTCCTTATTACCTCAGTGAGCAAACAAGGGTGTTGCTGACAAGTGCTGCTTATGTCCATTTAAAGCATGCTGAGGTTTCTAAATATACACGTAATCTTTCTCCTGCAAGCCGGGCTATTCTGCTCTCTGGACCAGCAGAACTTTACCAACAGGTGCTTGCTAAGGCCTTAGCCCATTTCTTCGAAGCAAAATTGCTTCTGTTAGATTTGACTAACTTTTCACTGAAGATTCAAAGCAAATATGGTTCTGCCAACAAAGAATCTTATTTGAAAAGGTCCGCTTCAGAGTTAACTTTGGAGCGGTTATCTGGCTTGTTTggatcattttcaatttttccacAGAGGGAAGAACCTAAAGGTTCAATACAGAGGCGGAGCAGTGGAGTGGACCTCCAATCAATGGGGACTGAAGGATCTTTTAATCCTCCTAAGCTTCGCAGAAATGCTTCTGCATCTGCAAATATAAGTGGCCTTGGTTTTCAAAGCACTCCCACGAATCCAGCTCCTCACAAGCACACAACCAACTGGTCTTTTGACGAAAAGCTTCTTATACAGTCCCTTTACAAGGTTCTGATGTTTGTGTCGAAAACCTATCCCATTGTGCTGTATCTGAGGGATGTTGATAAGCTGCTATTTAGATCACAGAGGATATATAACTTGTTCAAGAAAATGTTGGAGAAACTGTCTGGACCAATTTTGATTCTTGGTTCACGAATTTCGGGATCAGGTAATGATTACAGAGAGGGGGATGAGAGACTTACATCACTTTTCCCATATGATATAGACATCAGACCTCCAGAAGATGAATCGCATCTTGTCAGCTGGAAATCCCAACTGGAAGAGGATATGAAAAGGATACAGGTTCAGGATAATCGAAACCATATAATAGAAGTACTTGCATCCAATGATCTTGACTGTGATGACCTGGATTCAATCTGTGTGGGAGACACAATGGTTCTCAGTAACTATATAGAAGAGATTATTGTATCAGCAATTTCTTATCATTTAATGAAAAACAGAGACCCTGAATACAGAAATGGAAGACTTGTTCTATCAAGCGACAGTTTGTCCCATGCATTGAATATATTTCAGGCAGGGAAATCCACTGGAAGAGATACACTAAAATTGGAAGCTCAAGCTACGAAATCTGAGAAGGAAAGTGGGGAAGTTACTGCTTTGAAGCCAGAAGCGAAGTCTGAAATTGCATCTcctgaaaaaaaaactgaagCAGAAGTATCAACTTCAGTGGGTAAGCCGGGTGGTGAAAATTCAGTTCCAGCATCCAAAGCTGCTGAGGTCCCTCCTGATAATGAGTTTGAGAAGCGAATAAGGCCTGAGGTAATACCAGCAAACGAGATTGCTGTTACGTTCAATGATATTGGTTCCTTAGATGAGATCAAAGAATCCCTTCAGGAACTGGTGATGCTTCCTCTTCGAAGGCCAGACCTTTTCACTGGAGGCCTTCTGAAGCCTTGTAGAGGAATATTGCTATTTGGGCCTCCTGGCACTGGGAAGACAATGCTGGCGAAGGCCATCGCAAAAGAAGCTGGGGCAAGTTTCATCAACGTGTCCATGTCCACCATCACTTCCAAATGGTTTGGTGAAGATGAGAAAAATGTTCGAGCTTTATTCACACTGGCAGCCAAGGTCTCCCCAACCATTATATTTGTTGATGAGGTTGATAGCATGCTTGGGCAGCGGACCAGAGTTGGGGAGCATGAAGCCATGcggaaaataaagaatgaatttaTGACACATTGGGATGGGCTTATGACAAAAACAGGAGAGCGCATCCTTGTTCTTGCTGCAACCAATAGACCGTTTGACCTAGATGAAGCAATTATTAGGCGTTTTGAAAGGAGAATTATGGTAGGAATGCCATCTATAGAAAACAGGGAAAAGATTTTGAGGACTCTTTTGGCGAAAGAGAAGGTGGATGAGGGACTCGACTTTAAGGAGCTCGCAACTATTACAGAAGGATATAGTGGAAGTGATCTAAAGAACTTGTGCACAACTGCTGCTTACCGGCCTGTTAGAGAATTAATTCAACAGGAGAGACTAAAGACCCTGGATAAAAAACAGCTAGCTGCCGAAGGACAAACGATAGGAGATGTACAAGACAGAAAAGGTGAAGAGACCAGAGTTATTACCCTTAGGCCATTAAACATGCAGGACTTCAAAGAGGCTAAAAATCAGGTTGCCTCAAGCTTTGCAGCTGAGGGGGCTGGAATGAGTGAGTTGAAGCAGTGGAATGAATTGTACGGGGAAGGTGGTTCCAGGAAGAAAGAGCAATTAACGTACTTCCTTTA 2510 0.4275 MEQKSLLLSALSVGVGVGVGIGLASGQSASKGGANGSSSNAITAERMEQEMLRLVIDGRETKITFDQFPYYLSEQTRVLLTSAAYVHLKHAEVSKYTRNLSPASRAILLSGPAELYQQVLAKALAHFFEAKLLLLDLTNFSLKIQSKYGSANKESYLKRSASELTLERLSGLFGSFSIFPQREEPKGSIQRRSSGVDLQSMGTEGSFNPPKLRRNASASANISGLGFQSTPTNPAPHKHTTNWSFDEKLLIQSLYKVLMFVSKTYPIVLYLRDVDKLLFRSQRIYNLFKKMLEKLSGPILILGSRISGSGNDYREGDERLTSLFPYDIDIRPPEDESHLVSWKSQLEEDMKRIQVQDNRNHIIEVLASNDLDCDDLDSICVGDTMVLSNYIEEIIVSAISYHLMKNRDPEYRNGRLVLSSDSLSHALNIFQAGKSTGRDTLKLEAQATKSEKESGEVTALKPEAKSEIASPEKKTEAEVSTSVGKPGGENSVPASKAAEVPPDNEFEKRIRPEVIPANEIAVTFNDIGSLDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMTKTGERILVLAATNRPFDLDEAIIRRFERRIMVGMPSIENREKILRTLLAKEKVDEGLDFKELATITEGYSGSDLKNLCTTAAYRPVRELIQQERLKTLDKKQLAAEGQTIGDVQDRKGEETRVITLRPLNMQDFKEAKNQVASSFAAEGAGMSELKQWNELYGEGGSRKKEQLTYFL 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00100 836 SMART AAA_5 558 695 IPR003593 -
Bva08g00100 836 MobiDBLite consensus disorder prediction 446 474 - -
Bva08g00100 836 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 522 760 IPR027417 -
Bva08g00100 836 MobiDBLite consensus disorder prediction 192 212 - -
Bva08g00100 836 MobiDBLite consensus disorder prediction 446 502 - -
Bva08g00100 836 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 836 - -
Bva08g00100 836 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 836 - -
Bva08g00100 836 Pfam ATPase family associated with various cellular activities (AAA) 562 692 IPR003959 GO:0005524|GO:0016887
Bva08g00100 836 CDD AAA 560 692 - -
Bva08g00100 836 MobiDBLite consensus disorder prediction 185 212 - -
Bva08g00100 836 ProSitePatterns AAA-protein family signature. 665 684 IPR003960 GO:0005524|GO:0016887
Bva08g00100 836 Pfam AAA+ lid domain 716 752 IPR041569 -
Bva08g00100 836 Gene3D - 694 798 - -
Bva08g00100 836 Gene3D - 521 806 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00100 Bva-Chr8 505849 512470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00100 522 754 Calmodulin-binding Proteins AT3G56690 38.559 9.72e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00100 - - gmx:100807464 1318.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00100 08 505849 512470 Bva08g00100 08 505849 512470 ECH