Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00096 ATGGGCAACTGTAGCAGCGGCGTCACCTCCGGCAAAACCCAACTCAACCCTGGCGACGGCGCCACCTACTCTGGCCACCCTCCCAATCAACCTTCCAATGGCGGTATCTCTGTTCTTCCTTCCAATTCCAAGCCTGCACCACCTAAACCACACCTCTCTCCCTCCGTTGGCCGTGTCCTTGGCCGACCCATGGAAGATGTTCGTTCCACCTTCATCTTCGGCCGCGAACTGGGCCGTGGCCAATTCGGCGTAACTTACTTAGTCACCCACAAATTCACCAAAGAACAATTTGCCTGCAAATCCATCGCCACCCGCAAACTGATTAACCAAGACGACGTTGATGACATTCGGCGCGAGGTCCAAATCATGCATCACCTCACTGGTCACCGTAACATAGTCGAGCTTAAGGGAGCTTACGAGGATCGCCACTCTGTCAATTTGATCATGGAGCTCTGTGCTGGTGGGGAGCTCTTTGATAGGATAATAGCCAAGGGCCATTACTCTGAGAGAGCTGCAGCTAATTTGTGTCGCCAGATCGTGACGGTGGTCCATAATTGTCACTCAATGGGAGTGATGCATAGGGATTTGAAGCCTGAGAATTTCTTGTTCCTTAGTAAGGACGAGACTTCACCCCTAAAGGCTACGGACTTTGGTCTCTCCGTATTTTTCAAGCCAGGAGATTTATTCAATGATCTTGTTGGAAGTGCATATTATGTTGCTCCTGAGGTTCTGCGTAGAAGTTACGGACCTGAAGCTGATATTTGGAGTGCCGGGGTTATATTATACATTCTGCTCTGTGGAGTCCCGCCTTTCTGGGCAGaaaatgaacagGGTATCTTTGATGCCATTCTTCGTGGACATATTGATTTCATATCAGAACCTTGGCCTTCCATATCAAGTAGTGCCAAAGATCTGATCAGGAAAATGCTACGAGCTGACCCTAAAGAAAGGCTTTCAGCAGTTGAGGTCCTTAATCATCCTTGGGTGAGAGAAGATGGAGATGCATCTGATAAGCCTCTTGATATTGCTGTTTTAACCAGAATGAAGCAATTCCGGGCaatgaacaaattaaagaaagtagCTCTGAAGgTAATAGCAGAAAATCTTtctgaagaagaaattattggCTTGAAAGAAATGTTCAAATCCATGGACACAGATAACAGTGGAACAATCACTTTTGAGGAGTTGAAAGCTGGTCTCCCCAAACTGGGTACCAAGCTTTCTGAGTCAGAAGTAAGACAGTTGATGGAAGCGGCTGATGTAGATGGAAATGGCACCATTGATTACATTGAATTTATAACAGCTACCATGCACATGAACAGAATGGAAAGAGAGGACCATCTGTATAAAGCCTTTGAATATTTTGACAAGGATAAGAGCGGGTATATCACAATGGAAGAGTTGGAATCTGCTCTTAAGAAGTATAATATGGGTGATGAAAAGACTATAAAGGAGATCATTGCGGAAGTTGACACAGACAATGATGgaagaataaattatgatgAATTTGTAGCCATGATGAGGAAAGGAAGCCCAGAATTGTTTACCCATCTGTTATTCGAAGAGAAGGGCACGTTCGTACACCAGAGTTTGTGGACCTTGTGGGACAATTTTACTGTTGAATCTTCCTTCTCTATACTGGTTGCCTA 1652 0.4395 MGNCSSGVTSGKTQLNPGDGATYSGHPPNQPSNGGISVLPSNSKPAPPKPHLSPSVGRVLGRPMEDVRSTFIFGRELGRGQFGVTYLVTHKFTKEQFACKSIATRKLINQDDVDDIRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMELCAGGELFDRIIAKGHYSERAAANLCRQIVTVVHNCHSMGVMHRDLKPENFLFLSKDETSPLKATDFGLSVFFKPGDLFNDLVGSAYYVAPEVLRRSYGPEADIWSAGVILYILLCGVPPFWAENEQGIFDAILRGHIDFISEPWPSISSSAKDLIRKMLRADPKERLSAVEVLNHPWVREDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDKDKSGYITMEELESALKKYNMGDEKTIKEIIAEVDTDNDGRINYDEFVAMMRKGSPELFTHLLFEEKGTFVHQSLWTLWDNFTVESSFSILVA 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00096 550 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 15 42 515 - -
Bva08g00096 550 Gene3D Phosphorylase Kinase; domain 1 73 156 - -
Bva08g00096 550 CDD STKc_CAMK 71 328 - -
Bva08g00096 550 ProSitePatterns EF-hand calcium-binding domain. 492 504 IPR018247 -
Bva08g00096 550 ProSitePatterns EF-hand calcium-binding domain. 385 397 IPR018247 -
Bva08g00096 550 ProSiteProfiles EF-hand calcium-binding domain profile. 444 479 IPR002048 GO:0005509
Bva08g00096 550 ProSiteProfiles Protein kinase domain profile. 71 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00096 550 MobiDBLite consensus disorder prediction 1 40 - -
Bva08g00096 550 SUPERFAMILY EF-hand 368 509 IPR011992 -
Bva08g00096 550 MobiDBLite consensus disorder prediction 1 60 - -
Bva08g00096 550 Gene3D - 338 511 - -
Bva08g00096 550 Gene3D Transferase(Phosphotransferase) domain 1 157 337 - -
Bva08g00096 550 SUPERFAMILY Protein kinase-like (PK-like) 46 351 IPR011009 -
Bva08g00096 550 ProSiteProfiles EF-hand calcium-binding domain profile. 408 443 IPR002048 GO:0005509
Bva08g00096 550 SMART serkin_6 71 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00096 550 SMART efh_1 483 511 IPR002048 GO:0005509
Bva08g00096 550 SMART efh_1 376 404 IPR002048 GO:0005509
Bva08g00096 550 SMART efh_1 448 476 IPR002048 GO:0005509
Bva08g00096 550 SMART efh_1 412 440 IPR002048 GO:0005509
Bva08g00096 550 ProSitePatterns EF-hand calcium-binding domain. 457 469 IPR018247 -
Bva08g00096 550 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Bva08g00096 550 Pfam Protein kinase domain 74 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00096 550 ProSiteProfiles EF-hand calcium-binding domain profile. 480 514 IPR002048 GO:0005509
Bva08g00096 550 ProSitePatterns EF-hand calcium-binding domain. 421 433 IPR018247 -
Bva08g00096 550 Pfam EF-hand domain pair 447 509 IPR002048 GO:0005509
Bva08g00096 550 Pfam EF-hand domain pair 377 437 IPR002048 GO:0005509
Bva08g00096 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Bva08g00096 550 PANTHER SERINE/THREONINE-PROTEIN KINASE 42 515 - -
Bva08g00096 550 ProSiteProfiles EF-hand calcium-binding domain profile. 372 407 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00096 Bva-Chr8 485663 490215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00096 57 515 EF-hand Containing Proteins AT4G23650 81.481 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva08g00096 Pkinase 7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00096 K13412 - gmx:100777096 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00096 08 485663 490215 Bva08g00096 08 485663 490215 BWGD
Bva08g00096 08 485663 490215 Bva08g00096 08 485663 490215 ECH