Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00078 atggcaAACAAAATGCAGCTCAATTTGCTCATGTTTGCGTTGATTGGCTGCAATTTGATGTCGTCCGTAATTTCAAGAAAGACTTACGTTGTCGGAGATGCTAACGGTTGGCGTCTTCCCCCCCACCCAAGCTTCTATTCCGAATGGGCTAAGAACAAAATCTTCCGTGTTGGTGACACACTTGTATTCCCTTACCAACCTGGGTTGAACAACGTGGTGCAAGTTAGCAAGGAGGACTTCGACATATGCGCCATGAGAACGGACCTTGAACAATACTATGCAGGAAACTCCGAGATTACCTTGGATAAGCCAGGCGACTCCTACTTCTTCTGTTCCGTCGGCAAGCATTGTGAGTCAGGACAAAGGCTCCACATCACTGTTTCTTA 386 0.4611 MANKMQLNLLMFALIGCNLMSSVISRKTYVVGDANGWRLPPHPSFYSEWAKNKIFRVGDTLVFPYQPGLNNVVQVSKEDFDICAMRTDLEQYYAGNSEITLDKPGDSYFFCSVGKHCESGQRLHITVS 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00078 128 SUPERFAMILY Cupredoxins 27 127 IPR008972 -
Bva08g00078 128 Pfam Plastocyanin-like domain 40 121 IPR003245 GO:0009055
Bva08g00078 128 PANTHER BLUE COPPER PROTEIN 3 127 IPR039391 GO:0009055
Bva08g00078 128 ProSiteProfiles Phytocyanin domain profile. 27 128 IPR003245 GO:0009055
Bva08g00078 128 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 3 127 - -
Bva08g00078 128 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Bva08g00078 128 Gene3D - 26 128 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00078 Bva-Chr8 403155 403984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00078 6 127 Phytocyanin Superfamily AT4G31840 34.959 9.18e-25 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00078 - - pvu:PHAVU_002G295800g 151.754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00078 08 403155 403984 Bva08g00078 08 403155 403984 ECH