Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00062 ATGCTTACCAGTGAGCTAATTCAGGGGATGGAGGTAGCAAGAAAGTTGAAGGCAGATTTGAGGAGGACACCATCTCCGTTTGACAATAGGGACTTGCTGGTGCAGAGGATATTATCTTCCTATGAAAAGGCTCTGCTAATTCTAAGATGGAATGAGTCAAATTCCAAGTCGCAGCCTGTGGGGACAGCAACAGAGGGAGCTGGTCTCTCTCCAGAGTCTCCAATATCTGCTAACGGAAGTCCTCTAAGAGACGACATTGATCATCATGAGCATAAACCAGAGTCAAAGAAAAGAAAGTCAGTGGCTAGTTGGATGGATCAAGTTAGAGTGAGCTCAGAGACTGGCCTTGTCGGTCCCCAAGATGATGGCTATAGCTGGAGAAAATATGGGCAGAAAGACATCCTTGGTGCCAAATATCCAAGAAGTTATTACAGGTGCACCTACCGCAACAGCCAGAACTGCTGGGCCACAAAGCAAGTACAAAGATCAGATGAAGACCCTACTATATTTGATATCACTTACCGAGGAAAGCATACCTGTTCCCTAGGCAACAACGCCCTTCTGCCTCCAAACTCACCTCACCAACACGAGAAACTTGACAATAATGATGATAATCGCCATGGACAGTCATCACAAGAAGGCCTGCCAACGTTCACAAATATCCTGAGTGTTGATAACAATGACCCAGGAGACACACAGACAGCCTATCCTTTTACTTTCCCCTCAACTTCGTTTGGATGCAGCGCTCAAGAAAACCACACCTTACTCCCTTTCCCACTAGATAACGATTCCTTCCTGGGCAGTCTTTCTCAAACTAATCTATTTTTTCCAACCACGCCAGAATCAAACTATTTCCCGTCCCCTTCTTTCCAGATAAACAAGTTCGGTTGGATCAATAACAAGCAATGCTCAGAATCCGATATTACCGACATCATTTCAGCCAACACATCATCCACCAATTCTCCAATTCCTGATTTCGATTTCTCACTTGATCAAGTGGAAATTGATCCATATTTCCCATTTGACGCTCCAGATTTGCTCTCGTA 1046 0.4474 MLTSELIQGMEVARKLKADLRRTPSPFDNRDLLVQRILSSYEKALLILRWNESNSKSQPVGTATEGAGLSPESPISANGSPLRDDIDHHEHKPESKKRKSVASWMDQVRVSSETGLVGPQDDGYSWRKYGQKDILGAKYPRSYYRCTYRNSQNCWATKQVQRSDEDPTIFDITYRGKHTCSLGNNALLPPNSPHQHEKLDNNDDNRHGQSSQEGLPTFTNILSVDNNDPGDTQTAYPFTFPSTSFGCSAQENHTLLPFPLDNDSFLGSLSQTNLFFPTTPESNYFPSPSFQINKFGWINNKQCSESDITDIISANTSSTNSPIPDFDFSLDQVEIDPYFPFDAPDLLS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00062 348 MobiDBLite consensus disorder prediction 82 103 - -
Bva08g00062 348 SMART WRKY_cls 120 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g00062 348 MobiDBLite consensus disorder prediction 183 215 - -
Bva08g00062 348 ProSiteProfiles WRKY domain profile. 115 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g00062 348 MobiDBLite consensus disorder prediction 55 103 - -
Bva08g00062 348 Pfam WRKY DNA -binding domain 121 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g00062 348 Gene3D WRKY domain 105 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva08g00062 348 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 2 343 IPR044810 GO:0003700
Bva08g00062 348 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 2 343 - -
Bva08g00062 348 SUPERFAMILY WRKY DNA-binding domain 118 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva08g00062 348 MobiDBLite consensus disorder prediction 55 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00062 Bva-Chr8 338531 340270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00062 2 246 WRKY Transcription Factor Family AT4G23810 43.750 2.01e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva08g00062 WRKY 8.7e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00062 - - gmx:100815760 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01591 08 8366101 8370149 Bva08g00062 08 338531 340270 BWGD
Bva08g00062 08 338531 340270 Bva08g00062 08 338531 340270 ECH
Bva08g00062 08 338531 340270 Bva12g01983 12 15713752 15715770 ECH
Bva08g00062 08 338531 340270 Bva02g02014 02 21166103 21168542 ECH
Bva08g00062 08 338531 340270 Bva08g01907 08 12813091 12815407 ECH