Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00057 ATGGAGCGAATGAACGACGTTGTTGATGTAGGTTCCTCTCTATCAGAGCTCATATTATCAGGTGGAGCTAACACCTTTGATTCAATTTTCTCTCATTGCCCGACCCCGCCAACAAATGCTATTGCCAATCCTATGTTTGAGCCATTGGGCTCTTCCGTCTACCTCCACCAGAGAGATCTTCTGCAAAAGTTATATCAGCAAAGCAAGGCAAATGGTTCTTATGTCGGCACCTCATTCCCAAATCAGCCTCTAAACTCTCTGTGCACAACTTCTACTTCTTATATGACACCCTGCAAAAAGAAGCCATACAGGGGAGTCAGACAGAGGCACTGGGGCAAATGGGTTGCAGAGATTAGACTTCCTCAGAACAGAGTGAGAGTCTGGTTGGGTACTTATGAGACCGCTGAAGCTGCAGCTTATGCTTATGATCGTGCTGCCTATAAGCTTCGAGGTGAATATGCGCGTCTCAATTTCCCAAATCTCAAGGATCCAACTAAGTTAGGATTCGGAGATTGCACAAGATTGAATGCTTTAAAGAGCTCTGTGGATGCTAAAATTCAGGCTATATGTCAAAAGGTGAAAAGggagaaagcaaaaaagaaagcagCGAGGAAGCTCGCTTCTGGTACTCGCAAGTCTGAAACTAACGGTGGTGAGAGCGAGAGCGAGAAGTCGCAAAAGAATATTGACTCCTTCTCTGGCTCTTCTTCTCCCTTTCTCTTATCACCGTTAAATTTCGATGATTACTGGACAAACGAGTTGCTTTCACCAACTATTTCAGAAGACGGAATATGGAAGGGGGACAACTCAATGTCCTCTGTTTCAACAGAGTTTCCTACGACGGCAACAGAGGAAACAGAATTCGAAGGTTGTTCCTTGGCTAGGATGCCATCCTTCGATCCCGAGTTAATTTGGGAAGTTCTGGCCAATTA 932 0.4399 MERMNDVVDVGSSLSELILSGGANTFDSIFSHCPTPPTNAIANPMFEPLGSSVYLHQRDLLQKLYQQSKANGSYVGTSFPNQPLNSLCTTSTSYMTPCKKKPYRGVRQRHWGKWVAEIRLPQNRVRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNFPNLKDPTKLGFGDCTRLNALKSSVDAKIQAICQKVKREKAKKKAARKLASGTRKSETNGGESESEKSQKNIDSFSGSSSPFLLSPLNFDDYWTNELLSPTISEDGIWKGDNSMSSVSTEFPTTATEETEFEGCSLARMPSFDPELIWEVLAN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00057 310 SUPERFAMILY DNA-binding domain 102 159 IPR016177 GO:0003677
Bva08g00057 310 Pfam AP2 domain 103 152 IPR001471 GO:0003700|GO:0006355
Bva08g00057 310 ProSiteProfiles AP2/ERF domain profile. 102 159 IPR001471 GO:0003700|GO:0006355
Bva08g00057 310 PRINTS Ethylene responsive element binding protein signature 125 141 IPR001471 GO:0003700|GO:0006355
Bva08g00057 310 PRINTS Ethylene responsive element binding protein signature 103 114 IPR001471 GO:0003700|GO:0006355
Bva08g00057 310 Gene3D AP2/ERF domain 102 160 IPR036955 GO:0003700|GO:0006355
Bva08g00057 310 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 8 310 - -
Bva08g00057 310 MobiDBLite consensus disorder prediction 201 231 - -
Bva08g00057 310 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 8 310 - -
Bva08g00057 310 SMART rav1_2 102 165 IPR001471 GO:0003700|GO:0006355
Bva08g00057 310 CDD AP2 103 161 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00057 Bva-Chr8 323865 325352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00057 1 310 AP2-EREBP Transcription Factor Family AT1G64380 44.267 1.05e-64 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva08g00057 AP2 4.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00057 - - qlo:115975305 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00057 08 323865 325352 Bva08g00057 08 323865 325352 ECH